estExt_fgenesh1_pm.C_10719 (Cryphonectria parasitica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pm.C_10719 T56236_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_10719 RRM 261 313
estExt_fgenesh1_pm.C_10719 RRM 352 410
estExt_fgenesh1_pm.C_10719 RRM 486 551
estExt_fgenesh1_pm.C_10719 RRM 577 640

Links

Other RRM family RBPs
Other Cryphonectria parasitica RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pm.C_60118 Neurospora tetrasperma estExt_fgenesh1_pm.C_60118 N 0.946
NCU06459 Neurospora crassa NCU06459 N 0.942
MGG_08898 Magnaporthe oryzae MGG_08898 N 0.938
estExt_fgenesh3_kg.C_190032 Neurospora discreta estExt_fgenesh3_kg.C_190032 N 0.938
VDAG_06364 Verticillium dahliae VDAG_06364 N 0.934
fgenesh1_pg.4_#_772 Myceliophthora thermophila fgenesh1_pg.4_#_772 N 0.934
estExt_Genewise1.C_32212 Thielavia terrestris estExt_Genewise1.C_32212 N 0.930
CHGG_05709 Chaetomium globosum CHGG_05709 N 0.930
GLRG_03643 Colletotrichum graminicola GLRG_03643 N 0.930
Pa_7_9880 Podospora anserina Pa_7_9880 N 0.930
FGSG_05444 Fusarium graminearum FGSG_05444 N 0.926
FOXG_09455 Fusarium oxysporum FOXG_09455 N 0.921
FVEG_07083 Fusarium verticillioides FVEG_07083 N 0.921
e_gw1.10.53.1 Trichoderma virens e_gw1.10.53.1 N 0.918
e_gw1.17.287.1 Trichoderma reesei e_gw1.17.287.1 N 0.914
estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 Nectria haematococca estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 N 0.914
e_gw1.15.72.1 Trichoderma atroviride e_gw1.15.72.1 N 0.909
VDBG_08703 Verticillium albo atrum VDBG_08703 N 0.905
BC1G_14118 Botrytis cinerea BC1G_14118 N 0.905
SS1G_13716 Sclerotinia sclerotiorum SS1G_13716 N 0.901
GSTUMT00008077001 Tuber melanosporum GSTUMT00008077001 N 0.889
estExt_fgenesh1_pg.C_260060 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_260060 N 0.888
AFUA_2G05670 Aspergillus fumigatus CADAFUAG00003365 N 0.885
PTRG_09392 Pyrenophora tritici repentis PTRG_09392 N 0.885
NFIA_082390 Neosartorya fischeri CADNFIAG00007689 N 0.881
PMAA_071470 Penicillium marneffei PMAA_071470 N 0.881
BDBG_09466 Blastomyces dermatitidis BDBG_09466 N 0.877
estExt_Genewise1.C_240173 Cochliobolus heterostrophus C5 estExt_Genewise1.C_240173 N 0.877
ACLA_068670 Aspergillus clavatus CADACLAG00006690 N 0.873
fgenesh1_pm.00082_#_76 Aspergillus carbonarius fgenesh1_pm.00082_#_76 N 0.873
estExt_Genewise1Plus.C_chr_30420 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_30420 N 0.872
SNOG_13871 Stagonospora nodorum SNOG_13871 N 0.872
EAT78895.1 Phaeosphaeria nodorum EAT78895.1 N 0.872
AFLA_129820 Aspergillus flavus CADAFLAG00010040 N 0.869
ATEG_06757 Aspergillus terreus CADATEAG00009116 N 0.869
ANIA_07480 Aspergillus nidulans CADANIAG00000573 N 0.869
PABG_04754 Paracoccidioides brasiliensis PABG_04754 N 0.868
An02g14100 Aspergillus niger CADANGAG00002937 N 0.865
AO090001000681 Aspergillus oryzae CADAORAG00000620 N 0.865
CIMG_00769 Coccidioides immitis CIMG_00769 N 0.864
MCYG_03534 Microsporum canis MCYG_03534 N 0.860
UREG_00743 Uncinocarpus reesii UREG_00743 N 0.860
Pc22g08880 Penicillium chrysogenum Pc22g08880 N 0.860
CPSG_07981 Coccidioides posadasii CPSG_07981 N 0.857
TERG_04964 Trichophyton rubrum TERG_04964 N 0.852
TESG_05970 Trichophyton tonsurans TESG_05970 N 0.852
ARB_03865 Arthroderma benhamiae ARB_03865 N 0.852
MGYG_03143 Microsporum gypseum MGYG_03143 N 0.852
TEQG_01254 Trichophyton equinum TEQG_01254 N 0.852