CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAEL002461
(
Aedes aegypti
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AAEL002461
T32318_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL002461-PA
RRM
36
106
IFVGGLPSELTEGDLLAVFSQYGEIVNINLVRDKKTGKSKGFSFICFEDQRSTVLTVDNMNGIKLLGRTLR
Links
Other
RRM
family RBPs
Other
Aedes aegypti
RBPs
88 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH56844
Xenopus laevis
AAH56844
N
0.703
AGAP000977
Anopheles gambiae
AGAP000977
N
0.831
Ame_R006638
Ailuropoda melanoleuca
Ame_R006638
N
0.778
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.775
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.789
Bm1_02690
Brugia malayi
Bm1_02690
N
0.732
CAOG_00327
Capsaspora owczarzaki
CAOG_00327
N
0.732
CPIJ015641
Culex quinquefasciatus
CPIJ015641
N
0.878
CpipJ_CPIJ015641
Culex pipiens
CpipJ_CPIJ015641
N
0.878
DGIL_AUG5s13597g2t1
Acyrtosiphon pisum
DGIL_AUG5s13597g2t1
N
0.704
RBMX2
Anolis carolinensis
ENSACAG00000008819
N
0.792
LOC534630
Bos taurus
ENSBTAG00000006252
N
0.746
LOC613705
Bos taurus
ENSBTAG00000014771
N
0.718
RBMX2
Canis familiaris
ENSCAFG00000018770
N
0.757
LOC100388331
Callithrix jacchus
ENSCJAG00000002436
N
0.778
RBMX2
Cavia porcellus
ENSCPOG00000006640
N
0.778
rbmx2
Danio rerio
ENSDARG00000044380
N
0.761
LOC100058600
Equus caballus
ENSECAG00000008257
N
0.778
RBMX2
Erinaceus europaeus
ENSEEUG00000000839
N
0.750
RBMX2
Echinops telfairi
ENSETEG00000001763
N
0.764
RBMX2
Homo sapiens
ENSG00000134597
N
0.778
RBMX2
Gasterosteus aculeatus
ENSGACG00000001855
N
0.817
RBMX2
Gallus gallus
ENSGALG00000004025
N
0.750
ENSGGOG00000016146
Gorilla gorilla
ENSGGOG00000016146
N
0.764
RBMX2
Gorilla gorilla
ENSGGOG00000023687
N
0.778
ENSGGOG00000026106
Gorilla gorilla
ENSGGOG00000026106
N
0.736
RBMX2
Loxodonta africana
ENSLAFG00000017625
N
0.743
ENSLAFG00000028277
Loxodonta africana
ENSLAFG00000028277
N
0.817
RBMX2
Macropus eugenii
ENSMEUG00000010913
N
0.778
RBMX2
Meleagris gallopavo
ENSMGAG00000001801
N
0.736
RBMX2
Microcebus murinus
ENSMICG00000015139
N
0.778
ENSMLUG00000010298
Myotis lucifugus
ENSMLUG00000010298
N
0.778
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.789
RBMX2
Macaca mulatta
ENSMMUG00000008389
N
0.778
XP_001110036.1
Macaca mulatta
ENSMMUG00000020845
N
0.778
ENSMODG00000011981
Monodelphis domestica
ENSMODG00000011981
N
0.704
XM_001377711.1
Monodelphis domestica
ENSMODG00000012002
N
0.778
ENSMODG00000019800
Monodelphis domestica
ENSMODG00000019800
N
0.764
Rbmx2
Mus musculus
ENSMUSG00000031107
N
0.806
RBMX2
Ornithorhynchus anatinus
ENSOANG00000001362
N
0.743
RBMX2
Oryctolagus cuniculus
ENSOCUG00000011809
N
0.753
ENSOCUG00000020937
Oryctolagus cuniculus
ENSOCUG00000020937
N
0.757
ENSOGAG00000006237
Otolemur garnettii
ENSOGAG00000006237
N
0.778
ENSOGAG00000009060
Otolemur garnettii
ENSOGAG00000009060
N
0.722
RBMX2
Oryzias latipes
ENSORLG00000013183
N
0.831
RBMX2
Procavia capensis
ENSPCAG00000012903
N
0.722
ENSPPYG00000020717
Pongo pygmaeus
ENSPPYG00000020717
N
0.736
XR_023755.1
Pan troglodytes
ENSPTRG00000022269
N
0.736
RBMX2
Pteropus vampyrus
ENSPVAG00000004425
N
0.778
Rbmx2
Rattus norvegicus
ENSRNOG00000007371
N
0.792
RBMX2
Sorex araneus
ENSSARG00000007350
N
0.775
RBMX2
Spermophilus tridecemlineatus
ENSSTOG00000015391
N
0.792
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.775
RBMX2
Takifugu rubripes
ENSTRUG00000001699
N
0.761
RBMX2
Tarsius syrichta
ENSTSYG00000010611
N
0.732
RBMX2
Tursiops truncatus
ENSTTRG00000016210
N
0.778
estExt_fgenesh2_pg.C_1800064
Branchiostoma floridae
estExt_fgenesh2_pg.C_1800064
N
0.775
estExt_Genewise1Plus.C_110324
Daphnia pulex
estExt_Genewise1Plus.C_110324
N
0.732
e_gw1.98.15.1
Volvox carteri
e_gw1.98.15.1
N
0.732
CG10466
Drosophila melanogaster
FBgn0032822
N
0.775
GA10331-RA
Drosophila pseudoobscura
FBgn0070389
N
0.746
GF14433
Drosophila ananassae
FBgn0091460
N
0.775
GG21207
Drosophila erecta
FBgn0113387
N
0.761
GH13830
Drosophila grimshawi
FBgn0121306
N
0.761
GI11259
Drosophila mojavensis
FBgn0134020
N
0.732
GI11260
Drosophila mojavensis
FBgn0134021
N
0.732
GI20215
Drosophila mojavensis
FBgn0142951
N
0.732
GL26176
Drosophila persimilis
FBgn0163758
N
0.746
GM17378
Drosophila sechellia
FBgn0172288
N
0.775
GD24233
Drosophila simulans
FBgn0195582
N
0.775
GJ13600
Drosophila virilis
FBgn0200822
N
0.746
GK14925
Drosophila willistoni
FBgn0216930
N
0.789
GE13281
Drosophila yakuba
FBgn0230967
N
0.775
fgenesh1_pg.C_scaffold_53000041
Phytophthora ramorum
fgenesh1_pg.C_scaffold_53000041
N
0.718
fgenesh2_pg.C_sca_10000115
Lottia gigantea
fgenesh2_pg.C_sca_10000115
N
0.761
gw.130.169.1
Nematostella vectensis
gw.130.169.1
N
0.704
gw1.1.945.1
Micromonas pusilla
gw1.1.945.1
N
0.704
gw1.462.53.1
Capitella teleta
gw1.462.53.1
N
0.718
ISCW009356
Ixodes scapularis
ISCW009356
N
0.718
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.775
PHUM617480
Pediculus humanus
PHUM617480
N
0.718
PITG_06351
Phytophthora infestans
PITG_06351
N
0.732
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.746
SPPG_01752
Spizellomyces punctatus
SPPG_01752
N
0.716
WUBG_13107
Wuchereria bancrofti
WUBG_13107
N
0.732
XP_001180915.1
Strongylocentrotus purpuratus
XP_001180915.1
N
0.817
XP_002164481.1
Hydra magnipapillata
XP_002164481.1
N
0.803
XP_791635.2
Strongylocentrotus purpuratus
XP_791635.2
N
0.817