RBPMS (Gasterosteus aculeatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGACG00000019471 T37568_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000025740 RRM 25 87

Links

Other RRM family RBPs
Other Gasterosteus aculeatus RBPs

78 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAD16971 Xenopus laevis AAD16971 N 0.877
AAH60391 Xenopus laevis AAH60391 N 0.969
AAH81153 Xenopus laevis AAH81153 N 0.877
AAH97507 Xenopus laevis AAH97507 N 0.877
Ame_R002022 Ailuropoda melanoleuca Ame_R002022 N 0.877
Ame_R009021 Ailuropoda melanoleuca Ame_R009021 N 0.969
RBPMS Anolis carolinensis ENSACAG00000003012 N 0.969
RBPMS2 Anolis carolinensis ENSACAG00000012227 N 0.908
RBPMS2 Bos taurus ENSBTAG00000011037 N 0.877
Q2KI55_BOVIN Bos taurus ENSBTAG00000033727 N 0.969
RBPMS Canis familiaris ENSCAFG00000006503 N 0.969
RBPMS2 Canis familiaris ENSCAFG00000017098 N 0.877
RBPMS Choloepus hoffmanni ENSCHOG00000008745 N 0.969
LOC100409527 Callithrix jacchus ENSCJAG00000005200 N 0.862
LOC100392847 Callithrix jacchus ENSCJAG00000012366 N 0.969
RBPMS2 Cavia porcellus ENSCPOG00000007695 N 0.862
RBPMS Cavia porcellus ENSCPOG00000012799 N 0.969
RBPMS2 Danio rerio ENSDARG00000045930 N 0.922
rbpms2 Danio rerio ENSDARG00000079578 N 0.923
Rbpms2 Dipodomys ordii ENSDORG00000004025 N 0.864
A5YBM9_HORSE Equus caballus ENSECAG00000015345 N 0.877
RBPMS Equus caballus ENSECAG00000020735 N 0.969
RBPMS2 Echinops telfairi ENSETEG00000010176 N 0.862
RBPMS Echinops telfairi ENSETEG00000017582 N 0.969
RBPMS2 Felis catus ENSFCAG00000011333 N 0.877
RBPMS Homo sapiens ENSG00000157110 N 0.969
RBPMS2 Homo sapiens ENSG00000166831 N 0.862
RBPMS2 Gasterosteus aculeatus ENSGACG00000017472 N 0.891
RBPMS_CHICK Gallus gallus ENSGALG00000002355 N 0.892
RBPMS Gallus gallus ENSGALG00000010291 N 0.969
RBPMS2 Gorilla gorilla ENSGGOG00000008984 N 0.862
RBPMS Loxodonta africana ENSLAFG00000000209 N 0.969
RBPMS2 Loxodonta africana ENSLAFG00000018725 N 0.877
RBPMS2 Meleagris gallopavo ENSMGAG00000001128 N 0.892
RBPMS Meleagris gallopavo ENSMGAG00000005088 N 0.969
RBPMS2 Microcebus murinus ENSMICG00000007355 N 0.846
RBPMS Myotis lucifugus ENSMLUG00000009391 N 0.969
RBPMS2 Myotis lucifugus ENSMLUG00000013394 N 0.877
RBPMS Macaca mulatta ENSMMUG00000000458 N 0.969
RBPMS2 Macaca mulatta ENSMMUG00000013270 N 0.862
RBPMS2 Monodelphis domestica ENSMODG00000010487 N 0.892
RBPMS Monodelphis domestica ENSMODG00000019006 N 0.969
Rbpms Mus musculus ENSMUSG00000031586 N 0.969
Rbpms2 Mus musculus ENSMUSG00000032387 N 0.877
RBPMS2 Ornithorhynchus anatinus ENSOANG00000011802 N 0.877
RBPMS Oryctolagus cuniculus ENSOCUG00000008572 N 0.969
RBPMS2 Oryctolagus cuniculus ENSOCUG00000010388 N 0.877
RBPMS Otolemur garnettii ENSOGAG00000006285 N 0.742
RBPMS Ochotona princeps ENSOPRG00000013151 N 0.969
RBPMS2 Ochotona princeps ENSOPRG00000013668 N 0.848
RBPMS2 Oryzias latipes ENSORLG00000001493 N 0.922
RBPMS Oryzias latipes ENSORLG00000004135 N 1.000
RBPMS Procavia capensis ENSPCAG00000013493 N 0.969
RBPMS2 Procavia capensis ENSPCAG00000015797 N 0.877
ENSPPYG00000006553 Pongo pygmaeus ENSPPYG00000006553 N 0.710
ENSPPYG00000018487 Pongo pygmaeus ENSPPYG00000018487 N 0.969
RBPMS2 Pan troglodytes ENSPTRG00000007165 N 0.862
RBPMS Pan troglodytes ENSPTRG00000020135 N 0.969
RBPMS Pteropus vampyrus ENSPVAG00000001661 N 0.969
RBPMS2 Pteropus vampyrus ENSPVAG00000016622 N 0.877
RGD1561067 Rattus norvegicus ENSRNOG00000013328 N 0.969
Rbpms2 Rattus norvegicus ENSRNOG00000015896 N 0.877
RBPMS Sorex araneus ENSSARG00000000274 N 0.953
RBPMS2 Sus scrofa ENSSSCG00000004549 N 0.877
RBPMS Sus scrofa ENSSSCG00000015846 N 0.969
RBPMS2 Spermophilus tridecemlineatus ENSSTOG00000010055 N 0.877
RBPMS Taeniopygia guttata ENSTGUG00000001776 N 0.969
RBPMS2 Taeniopygia guttata ENSTGUG00000004722 N 0.892
RBPMS Takifugu rubripes ENSTRUG00000000041 N 1.000
RBPMS2 Takifugu rubripes ENSTRUG00000016625 N 0.908
RBPMS Tarsius syrichta ENSTSYG00000013982 N 0.968
RBPMS2 Tursiops truncatus ENSTTRG00000011840 N 0.877
RBPMS Tursiops truncatus ENSTTRG00000012451 N 0.953
RBPMS Vicugna pacos ENSVPAG00000010991 N 0.969
ENSXETG00000010668 Xenopus tropicalis ENSXETG00000010668 N 0.877
rbpms Xenopus tropicalis ENSXETG00000011290 N 0.969
e_gw.368.37.1 Branchiostoma floridae e_gw.368.37.1 I 0.781
Q9YGP5 Xenopus laevis Q9YGP5 N 0.877