CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSGGOG00000026106
(
Gorilla gorilla
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGGOG00000026106
T37936_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000024973
RRM
38
108
IFLGGLPYELTEGDIICVFSQYGEIVNINLMWDKKTGKSKGFCFLCYEDQRSTILAIDNFNGIKIKGRTIR
Links
Other
RRM
family RBPs
Other
Gorilla gorilla
RBPs
84 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
145168
Helobdella robusta
145168
N
0.736
AAEL002461
Aedes aegypti
AAEL002461
N
0.736
AAH56844
Xenopus laevis
AAH56844
N
0.707
AGAP000977
Anopheles gambiae
AGAP000977
N
0.736
Ame_R006638
Ailuropoda melanoleuca
Ame_R006638
N
0.958
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.778
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.778
Bm1_02690
Brugia malayi
Bm1_02690
N
0.736
RBMX2
Anolis carolinensis
ENSACAG00000008819
N
0.915
LOC534630
Bos taurus
ENSBTAG00000006252
N
0.889
LOC613705
Bos taurus
ENSBTAG00000014771
N
0.875
RBMX2
Canis familiaris
ENSCAFG00000018770
N
0.919
LOC100388331
Callithrix jacchus
ENSCJAG00000002436
N
0.958
RBMX2
Cavia porcellus
ENSCPOG00000006640
N
0.944
ENSCSAVG00000001047
Ciona savignyi
ENSCSAVG00000001047
N
0.764
rbmx2
Danio rerio
ENSDARG00000044380
N
0.875
LOC100058600
Equus caballus
ENSECAG00000008257
N
0.958
RBMX2
Erinaceus europaeus
ENSEEUG00000000839
N
0.887
RBMX2
Echinops telfairi
ENSETEG00000001763
N
0.930
RBMX2
Homo sapiens
ENSG00000134597
N
0.958
RBMX2
Gasterosteus aculeatus
ENSGACG00000001855
N
0.833
RBMX2
Gallus gallus
ENSGALG00000004025
N
0.873
ENSGGOG00000016146
Gorilla gorilla
ENSGGOG00000016146
N
0.944
RBMX2
Gorilla gorilla
ENSGGOG00000023687
N
0.958
RBMX2
Loxodonta africana
ENSLAFG00000017625
N
0.878
ENSLAFG00000028277
Loxodonta africana
ENSLAFG00000028277
N
0.861
RBMX2
Macropus eugenii
ENSMEUG00000010913
N
0.944
RBMX2
Meleagris gallopavo
ENSMGAG00000001801
N
0.859
RBMX2
Microcebus murinus
ENSMICG00000015139
N
0.958
ENSMLUG00000010298
Myotis lucifugus
ENSMLUG00000010298
N
0.958
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.917
ENSMMUG00000001001
Macaca mulatta
ENSMMUG00000001001
N
0.901
RBMX2
Macaca mulatta
ENSMMUG00000008389
N
0.958
XP_001110036.1
Macaca mulatta
ENSMMUG00000020845
N
0.944
ENSMODG00000011981
Monodelphis domestica
ENSMODG00000011981
N
0.792
XM_001377711.1
Monodelphis domestica
ENSMODG00000012002
N
0.915
ENSMODG00000019800
Monodelphis domestica
ENSMODG00000019800
N
0.930
Rbmx2
Mus musculus
ENSMUSG00000031107
N
0.930
RBMX2
Ornithorhynchus anatinus
ENSOANG00000001362
N
0.851
RBMX2
Oryctolagus cuniculus
ENSOCUG00000011809
N
0.904
ENSOCUG00000020937
Oryctolagus cuniculus
ENSOCUG00000020937
N
0.747
ENSOGAG00000006237
Otolemur garnettii
ENSOGAG00000006237
N
0.958
ENSOGAG00000009060
Otolemur garnettii
ENSOGAG00000009060
N
0.887
RBMX2
Oryzias latipes
ENSORLG00000013183
N
0.847
RBMX2
Procavia capensis
ENSPCAG00000012903
N
0.887
ENSPPYG00000020717
Pongo pygmaeus
ENSPPYG00000020717
N
0.901
XR_023755.1
Pan troglodytes
ENSPTRG00000022269
N
0.901
RBMX2
Pteropus vampyrus
ENSPVAG00000004425
N
0.958
Rbmx2
Rattus norvegicus
ENSRNOG00000007371
N
0.944
RBMX2
Sorex araneus
ENSSARG00000007350
N
0.875
RBMX2
Spermophilus tridecemlineatus
ENSSTOG00000015391
N
0.930
RBMX2
Taeniopygia guttata
ENSTGUG00000005239
N
0.775
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.861
RBMX2
Takifugu rubripes
ENSTRUG00000001699
N
0.875
RBMX2
Tarsius syrichta
ENSTSYG00000010611
N
0.819
RBMX2
Tursiops truncatus
ENSTTRG00000016210
N
0.958
estExt_fgenesh2_pg.C_1800064
Branchiostoma floridae
estExt_fgenesh2_pg.C_1800064
N
0.764
estExt_Genewise1Plus.C_110324
Daphnia pulex
estExt_Genewise1Plus.C_110324
N
0.778
CG10466
Drosophila melanogaster
FBgn0032822
N
0.750
GA10331-RA
Drosophila pseudoobscura
FBgn0070389
N
0.764
GF14433
Drosophila ananassae
FBgn0091460
N
0.764
GG21207
Drosophila erecta
FBgn0113387
N
0.764
GH13830
Drosophila grimshawi
FBgn0121306
N
0.736
GI11259
Drosophila mojavensis
FBgn0134020
N
0.764
GI11260
Drosophila mojavensis
FBgn0134021
N
0.764
GI20215
Drosophila mojavensis
FBgn0142951
N
0.764
GL26176
Drosophila persimilis
FBgn0163758
N
0.764
GM17378
Drosophila sechellia
FBgn0172288
N
0.750
GD24233
Drosophila simulans
FBgn0195582
N
0.750
GJ13600
Drosophila virilis
FBgn0200822
N
0.778
GK14925
Drosophila willistoni
FBgn0216930
N
0.764
GE13281
Drosophila yakuba
FBgn0230967
N
0.750
fgenesh2_pg.C_sca_10000115
Lottia gigantea
fgenesh2_pg.C_sca_10000115
N
0.736
gw.130.169.1
Nematostella vectensis
gw.130.169.1
N
0.750
gw1.1.2244.1
Trichoplax adhaerens
gw1.1.2244.1
N
0.722
gw1.462.53.1
Capitella teleta
gw1.462.53.1
N
0.778
ISCW009356
Ixodes scapularis
ISCW009356
N
0.708
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.792
PHUM617480
Pediculus humanus
PHUM617480
N
0.764
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.736
WUBG_13107
Wuchereria bancrofti
WUBG_13107
N
0.736
XP_001180915.1
Strongylocentrotus purpuratus
XP_001180915.1
N
0.792
XP_002164481.1
Hydra magnipapillata
XP_002164481.1
N
0.792
XP_791635.2
Strongylocentrotus purpuratus
XP_791635.2
N
0.792