CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMMUG00000001001
(
Macaca mulatta
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMMUG00000001001
T38797_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000001344
RRM
34
103
IFLGGLPYELTEGDIVCVFSQYGIVNINLMRDKKTGKSKGFCFLCYKGQRSTILAIDNFNGIKMKGRTIQ
ENSMMUP00000040783
RRM
33
102
IFLGGLPYELTEGDIVCVFSQYGIVNINLMRDKKTGKSKGFCFLCYKGQRSTILAIDNFNGIKMKGRTIQ
Links
Other
RRM
family RBPs
Other
Macaca mulatta
RBPs
66 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSGGOG00000026106
Gorilla gorilla
ENSGGOG00000026106
N
0.901
RBMX2
Gorilla gorilla
ENSGGOG00000023687
N
0.887
RBMX2
Microcebus murinus
ENSMICG00000015139
N
0.887
RBMX2
Pteropus vampyrus
ENSPVAG00000004425
N
0.887
RBMX2
Homo sapiens
ENSG00000134597
N
0.887
LOC100388331
Callithrix jacchus
ENSCJAG00000002436
N
0.887
LOC100058600
Equus caballus
ENSECAG00000008257
N
0.887
Ame_R006638
Ailuropoda melanoleuca
Ame_R006638
N
0.887
ENSOGAG00000006237
Otolemur garnettii
ENSOGAG00000006237
N
0.887
RBMX2
Tursiops truncatus
ENSTTRG00000016210
N
0.887
XP_001110036.1
Macaca mulatta
ENSMMUG00000020845
N
0.887
RBMX2
Macaca mulatta
ENSMMUG00000008389
N
0.887
ENSMLUG00000010298
Myotis lucifugus
ENSMLUG00000010298
N
0.887
Rbmx2
Rattus norvegicus
ENSRNOG00000007371
N
0.873
RBMX2
Macropus eugenii
ENSMEUG00000010913
N
0.873
RBMX2
Cavia porcellus
ENSCPOG00000006640
N
0.873
ENSGGOG00000016146
Gorilla gorilla
ENSGGOG00000016146
N
0.873
ENSMODG00000019800
Monodelphis domestica
ENSMODG00000019800
N
0.859
RBMX2
Echinops telfairi
ENSETEG00000001763
N
0.859
RBMX2
Spermophilus tridecemlineatus
ENSSTOG00000015391
N
0.859
Rbmx2
Mus musculus
ENSMUSG00000031107
N
0.859
RBMX2
Canis familiaris
ENSCAFG00000018770
N
0.851
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.847
XM_001377711.1
Monodelphis domestica
ENSMODG00000012002
N
0.845
RBMX2
Anolis carolinensis
ENSACAG00000008819
N
0.845
RBMX2
Oryctolagus cuniculus
ENSOCUG00000011809
N
0.836
ENSPPYG00000020717
Pongo pygmaeus
ENSPPYG00000020717
N
0.831
XR_023755.1
Pan troglodytes
ENSPTRG00000022269
N
0.831
RBMX2
Erinaceus europaeus
ENSEEUG00000000839
N
0.817
RBMX2
Procavia capensis
ENSPCAG00000012903
N
0.817
ENSOGAG00000009060
Otolemur garnettii
ENSOGAG00000009060
N
0.817
RBMX2
Loxodonta africana
ENSLAFG00000017625
N
0.811
LOC534630
Bos taurus
ENSBTAG00000006252
N
0.806
LOC613705
Bos taurus
ENSBTAG00000014771
N
0.806
RBMX2
Sorex araneus
ENSSARG00000007350
N
0.806
RBMX2
Takifugu rubripes
ENSTRUG00000001699
N
0.806
rbmx2
Danio rerio
ENSDARG00000044380
N
0.806
ENSLAFG00000028277
Loxodonta africana
ENSLAFG00000028277
N
0.806
RBMX2
Gallus gallus
ENSGALG00000004025
N
0.803
RBMX2
Ornithorhynchus anatinus
ENSOANG00000001362
N
0.797
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.792
RBMX2
Oryzias latipes
ENSORLG00000013183
N
0.792
RBMX2
Meleagris gallopavo
ENSMGAG00000001801
N
0.789
RBMX2
Tarsius syrichta
ENSTSYG00000010611
N
0.778
RBMX2
Gasterosteus aculeatus
ENSGACG00000001855
N
0.764
XP_002164481.1
Hydra magnipapillata
XP_002164481.1
N
0.750
XP_001180915.1
Strongylocentrotus purpuratus
XP_001180915.1
N
0.750
XP_791635.2
Strongylocentrotus purpuratus
XP_791635.2
N
0.750
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.736
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.736
gw1.462.53.1
Capitella teleta
gw1.462.53.1
N
0.736
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.722
ENSMODG00000011981
Monodelphis domestica
ENSMODG00000011981
N
0.722
GG21207
Drosophila erecta
FBgn0113387
N
0.722
GK14925
Drosophila willistoni
FBgn0216930
N
0.722
gw.130.169.1
Nematostella vectensis
gw.130.169.1
N
0.722
estExt_fgenesh2_pg.C_1800064
Branchiostoma floridae
estExt_fgenesh2_pg.C_1800064
N
0.722
estExt_Genewise1Plus.C_110324
Daphnia pulex
estExt_Genewise1Plus.C_110324
N
0.722
CG10466
Drosophila melanogaster
FBgn0032822
N
0.708
GM17378
Drosophila sechellia
FBgn0172288
N
0.708
GE13281
Drosophila yakuba
FBgn0230967
N
0.708
GD24233
Drosophila simulans
FBgn0195582
N
0.708
GJ13600
Drosophila virilis
FBgn0200822
N
0.708
ENSOCUG00000020937
Oryctolagus cuniculus
ENSOCUG00000020937
N
0.707
RBMX2
Taeniopygia guttata
ENSTGUG00000005239
N
0.704