CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBMX2
(
Loxodonta africana
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSLAFG00000017625
T38083_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000014778
RRM
38
111
VFLGGLPYELTEGDIICVFSQINRYGEVVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIR
Links
Other
RRM
family RBPs
Other
Loxodonta africana
RBPs
89 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
145168
Helobdella robusta
145168
N
0.730
AAEL002461
Aedes aegypti
AAEL002461
N
0.743
AAH56844
Xenopus laevis
AAH56844
N
0.727
AGAP000977
Anopheles gambiae
AGAP000977
N
0.743
Ame_R006638
Ailuropoda melanoleuca
Ame_R006638
N
0.919
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.757
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.757
Bm1_02690
Brugia malayi
Bm1_02690
N
0.703
CAOG_00327
Capsaspora owczarzaki
CAOG_00327
N
0.730
CBG02589
Caenorhabditis briggsae
CBG02589
N
0.703
CRE26315
Caenorhabditis remanei
CRE26315
N
0.716
RBMX2
Anolis carolinensis
ENSACAG00000008819
N
0.905
LOC534630
Bos taurus
ENSBTAG00000006252
N
0.878
LOC613705
Bos taurus
ENSBTAG00000014771
N
0.838
RBMX2
Canis familiaris
ENSCAFG00000018770
N
0.959
LOC100388331
Callithrix jacchus
ENSCJAG00000002436
N
0.959
RBMX2
Cavia porcellus
ENSCPOG00000006640
N
0.905
ENSCSAVG00000001047
Ciona savignyi
ENSCSAVG00000001047
N
0.730
rbmx2
Danio rerio
ENSDARG00000044380
N
0.878
LOC100058600
Equus caballus
ENSECAG00000008257
N
0.919
RBMX2
Erinaceus europaeus
ENSEEUG00000000839
N
0.892
RBMX2
Echinops telfairi
ENSETEG00000001763
N
0.919
RBMX2
Homo sapiens
ENSG00000134597
N
0.919
RBMX2
Gasterosteus aculeatus
ENSGACG00000001855
N
0.838
RBMX2
Gallus gallus
ENSGALG00000004025
N
0.919
ENSGGOG00000016146
Gorilla gorilla
ENSGGOG00000016146
N
0.905
RBMX2
Gorilla gorilla
ENSGGOG00000023687
N
0.919
ENSGGOG00000026106
Gorilla gorilla
ENSGGOG00000026106
N
0.878
ENSLAFG00000028277
Loxodonta africana
ENSLAFG00000028277
N
0.865
RBMX2
Macropus eugenii
ENSMEUG00000010913
N
0.905
RBMX2
Meleagris gallopavo
ENSMGAG00000001801
N
0.892
RBMX2
Microcebus murinus
ENSMICG00000015139
N
0.919
ENSMLUG00000010298
Myotis lucifugus
ENSMLUG00000010298
N
0.919
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.892
ENSMMUG00000001001
Macaca mulatta
ENSMMUG00000001001
N
0.811
RBMX2
Macaca mulatta
ENSMMUG00000008389
N
0.919
XP_001110036.1
Macaca mulatta
ENSMMUG00000020845
N
0.905
ENSMODG00000011981
Monodelphis domestica
ENSMODG00000011981
N
0.743
XM_001377711.1
Monodelphis domestica
ENSMODG00000012002
N
0.905
ENSMODG00000019800
Monodelphis domestica
ENSMODG00000019800
N
0.905
Rbmx2
Mus musculus
ENSMUSG00000031107
N
0.919
RBMX2
Ornithorhynchus anatinus
ENSOANG00000001362
N
0.878
RBMX2
Oryctolagus cuniculus
ENSOCUG00000011809
N
0.946
ENSOCUG00000020937
Oryctolagus cuniculus
ENSOCUG00000020937
N
0.779
ENSOGAG00000006237
Otolemur garnettii
ENSOGAG00000006237
N
0.919
ENSOGAG00000009060
Otolemur garnettii
ENSOGAG00000009060
N
0.865
RBMX2
Oryzias latipes
ENSORLG00000013183
N
0.824
RBMX2
Procavia capensis
ENSPCAG00000012903
N
0.892
ENSPPYG00000020717
Pongo pygmaeus
ENSPPYG00000020717
N
0.878
XR_023755.1
Pan troglodytes
ENSPTRG00000022269
N
0.878
RBMX2
Pteropus vampyrus
ENSPVAG00000004425
N
0.919
Rbmx2
Rattus norvegicus
ENSRNOG00000007371
N
0.932
RBMX2
Sorex araneus
ENSSARG00000007350
N
0.851
RBMX2
Spermophilus tridecemlineatus
ENSSTOG00000015391
N
0.919
RBMX2
Taeniopygia guttata
ENSTGUG00000005239
N
0.784
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.865
RBMX2
Takifugu rubripes
ENSTRUG00000001699
N
0.878
RBMX2
Tarsius syrichta
ENSTSYG00000010611
N
0.824
RBMX2
Tursiops truncatus
ENSTTRG00000016210
N
0.919
estExt_fgenesh1_pg.C_30395
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_30395
N
0.716
estExt_fgenesh2_pg.C_1800064
Branchiostoma floridae
estExt_fgenesh2_pg.C_1800064
N
0.797
estExt_Genewise1Plus.C_110324
Daphnia pulex
estExt_Genewise1Plus.C_110324
N
0.784
CG10466
Drosophila melanogaster
FBgn0032822
N
0.770
GA10331-RA
Drosophila pseudoobscura
FBgn0070389
N
0.797
GF14433
Drosophila ananassae
FBgn0091460
N
0.797
GG21207
Drosophila erecta
FBgn0113387
N
0.784
GH13830
Drosophila grimshawi
FBgn0121306
N
0.770
GI11259
Drosophila mojavensis
FBgn0134020
N
0.797
GI11260
Drosophila mojavensis
FBgn0134021
N
0.797
GI20215
Drosophila mojavensis
FBgn0142951
N
0.797
GL26176
Drosophila persimilis
FBgn0163758
N
0.797
GM17378
Drosophila sechellia
FBgn0172288
N
0.770
GD24233
Drosophila simulans
FBgn0195582
N
0.770
GJ13600
Drosophila virilis
FBgn0200822
N
0.784
GK14925
Drosophila willistoni
FBgn0216930
N
0.797
GE13281
Drosophila yakuba
FBgn0230967
N
0.770
fgenesh2_pg.C_sca_10000115
Lottia gigantea
fgenesh2_pg.C_sca_10000115
N
0.757
gw.130.169.1
Nematostella vectensis
gw.130.169.1
N
0.757
gw1.1.2244.1
Trichoplax adhaerens
gw1.1.2244.1
N
0.757
gw1.1.3012.1
Tremella mesenterica
gw1.1.3012.1
N
0.716
gw1.462.53.1
Capitella teleta
gw1.462.53.1
N
0.770
ISCW009356
Ixodes scapularis
ISCW009356
N
0.703
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.770
PHUM617480
Pediculus humanus
PHUM617480
N
0.797
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.757
WUBG_13107
Wuchereria bancrofti
WUBG_13107
N
0.703
XP_001180915.1
Strongylocentrotus purpuratus
XP_001180915.1
N
0.770
XP_002164481.1
Hydra magnipapillata
XP_002164481.1
N
0.770
XP_791635.2
Strongylocentrotus purpuratus
XP_791635.2
N
0.770