CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
RBMX2
(
Oryctolagus cuniculus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOCUG00000011809
T39693_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000010148
RRM
38
110
IFLGGLPYELTEGDVICVFSQNRYGEVVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIR
Links
Other
RRM
family RBPs
Other
Oryctolagus cuniculus
RBPs
94 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
145168
Helobdella robusta
145168
N
0.753
AAEL002461
Aedes aegypti
AAEL002461
N
0.753
AAH56844
Xenopus laevis
AAH56844
N
0.750
AGAP000977
Anopheles gambiae
AGAP000977
N
0.767
Ame_R006638
Ailuropoda melanoleuca
Ame_R006638
N
0.945
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.808
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.808
Bm1_02690
Brugia malayi
Bm1_02690
N
0.753
C30B5.4
Caenorhabditis elegans
C30B5.4
N
0.740
CAOG_00327
Capsaspora owczarzaki
CAOG_00327
N
0.712
CBG02589
Caenorhabditis briggsae
CBG02589
N
0.726
CBN24057
Caenorhabditis brenneri
CBN24057
N
0.712
CJA10629
Caenorhabditis japonica
CJA10629
N
0.712
CRE26315
Caenorhabditis remanei
CRE26315
N
0.740
RBMX2
Anolis carolinensis
ENSACAG00000008819
N
0.904
LOC534630
Bos taurus
ENSBTAG00000006252
N
0.877
LOC613705
Bos taurus
ENSBTAG00000014771
N
0.863
RBMX2
Canis familiaris
ENSCAFG00000018770
N
0.959
LOC100388331
Callithrix jacchus
ENSCJAG00000002436
N
0.959
RBMX2
Cavia porcellus
ENSCPOG00000006640
N
0.959
ENSCSAVG00000001047
Ciona savignyi
ENSCSAVG00000001047
N
0.781
rbmx2
Danio rerio
ENSDARG00000044380
N
0.877
LOC100058600
Equus caballus
ENSECAG00000008257
N
0.945
RBMX2
Erinaceus europaeus
ENSEEUG00000000839
N
0.877
RBMX2
Echinops telfairi
ENSETEG00000001763
N
0.973
RBMX2
Homo sapiens
ENSG00000134597
N
0.945
RBMX2
Gasterosteus aculeatus
ENSGACG00000001855
N
0.836
RBMX2
Gallus gallus
ENSGALG00000004025
N
0.918
ENSGGOG00000016146
Gorilla gorilla
ENSGGOG00000016146
N
0.932
RBMX2
Gorilla gorilla
ENSGGOG00000023687
N
0.945
ENSGGOG00000026106
Gorilla gorilla
ENSGGOG00000026106
N
0.904
RBMX2
Loxodonta africana
ENSLAFG00000017625
N
0.946
ENSLAFG00000028277
Loxodonta africana
ENSLAFG00000028277
N
0.863
RBMX2
Macropus eugenii
ENSMEUG00000010913
N
0.932
RBMX2
Meleagris gallopavo
ENSMGAG00000001801
N
0.904
RBMX2
Microcebus murinus
ENSMICG00000015139
N
0.945
ENSMLUG00000010298
Myotis lucifugus
ENSMLUG00000010298
N
0.945
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.918
ENSMMUG00000001001
Macaca mulatta
ENSMMUG00000001001
N
0.836
RBMX2
Macaca mulatta
ENSMMUG00000008389
N
0.945
XP_001110036.1
Macaca mulatta
ENSMMUG00000020845
N
0.932
ENSMODG00000011981
Monodelphis domestica
ENSMODG00000011981
N
0.767
XM_001377711.1
Monodelphis domestica
ENSMODG00000012002
N
0.904
ENSMODG00000019800
Monodelphis domestica
ENSMODG00000019800
N
0.918
Rbmx2
Mus musculus
ENSMUSG00000031107
N
0.918
RBMX2
Ornithorhynchus anatinus
ENSOANG00000001362
N
0.905
ENSOCUG00000020937
Oryctolagus cuniculus
ENSOCUG00000020937
N
0.750
ENSOGAG00000006237
Otolemur garnettii
ENSOGAG00000006237
N
0.945
ENSOGAG00000009060
Otolemur garnettii
ENSOGAG00000009060
N
0.877
RBMX2
Oryzias latipes
ENSORLG00000013183
N
0.863
RBMX2
Procavia capensis
ENSPCAG00000012903
N
0.904
ENSPPYG00000020717
Pongo pygmaeus
ENSPPYG00000020717
N
0.890
XR_023755.1
Pan troglodytes
ENSPTRG00000022269
N
0.890
RBMX2
Pteropus vampyrus
ENSPVAG00000004425
N
0.945
Rbmx2
Rattus norvegicus
ENSRNOG00000007371
N
0.932
RBMX2
Sorex araneus
ENSSARG00000007350
N
0.904
RBMX2
Spermophilus tridecemlineatus
ENSSTOG00000015391
N
0.945
RBMX2
Taeniopygia guttata
ENSTGUG00000005239
N
0.822
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.863
RBMX2
Takifugu rubripes
ENSTRUG00000001699
N
0.877
RBMX2
Tarsius syrichta
ENSTSYG00000010611
N
0.849
RBMX2
Tursiops truncatus
ENSTTRG00000016210
N
0.945
estExt_fgenesh1_pg.C_30395
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_30395
N
0.740
estExt_fgenesh1_pg.C_410012
Monosiga brevicollis
estExt_fgenesh1_pg.C_410012
N
0.740
estExt_fgenesh2_pg.C_1800064
Branchiostoma floridae
estExt_fgenesh2_pg.C_1800064
N
0.795
estExt_Genewise1Plus.C_110324
Daphnia pulex
estExt_Genewise1Plus.C_110324
N
0.808
CG10466
Drosophila melanogaster
FBgn0032822
N
0.781
GA10331-RA
Drosophila pseudoobscura
FBgn0070389
N
0.795
GF14433
Drosophila ananassae
FBgn0091460
N
0.808
GG21207
Drosophila erecta
FBgn0113387
N
0.781
GH13830
Drosophila grimshawi
FBgn0121306
N
0.781
GI11259
Drosophila mojavensis
FBgn0134020
N
0.795
GI11260
Drosophila mojavensis
FBgn0134021
N
0.795
GI20215
Drosophila mojavensis
FBgn0142951
N
0.795
GL26176
Drosophila persimilis
FBgn0163758
N
0.795
GM17378
Drosophila sechellia
FBgn0172288
N
0.781
GD24233
Drosophila simulans
FBgn0195582
N
0.781
GJ13600
Drosophila virilis
FBgn0200822
N
0.781
GK14925
Drosophila willistoni
FBgn0216930
N
0.808
GE13281
Drosophila yakuba
FBgn0230967
N
0.781
fgenesh2_pg.C_sca_10000115
Lottia gigantea
fgenesh2_pg.C_sca_10000115
N
0.781
gw.130.169.1
Nematostella vectensis
gw.130.169.1
N
0.753
gw1.1.2244.1
Trichoplax adhaerens
gw1.1.2244.1
N
0.740
gw1.1.3012.1
Tremella mesenterica
gw1.1.3012.1
N
0.712
gw1.462.53.1
Capitella teleta
gw1.462.53.1
N
0.795
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.822
PHUM617480
Pediculus humanus
PHUM617480
N
0.781
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.753
Sjc_0109550
Schistosoma japonicum
Sjc_0109550
N
0.711
Smp_170230
Schistosoma mansoni
Smp_170230
N
0.711
WUBG_13107
Wuchereria bancrofti
WUBG_13107
N
0.753
XP_001180915.1
Strongylocentrotus purpuratus
XP_001180915.1
N
0.822
XP_002164481.1
Hydra magnipapillata
XP_002164481.1
N
0.822
XP_791635.2
Strongylocentrotus purpuratus
XP_791635.2
N
0.822