ELAVL3 (Tupaia belangeri)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTBEG00000006133 T41728_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL4
M313_0.6 		Homo sapiens Sequence logo not available CYCUCCYUCYCYC RIP-chip
Cook et al.(2011)
619_19846595 		0.778
ELAVL4
M315_0.6 		Homo sapiens Sequence logo not available UUUUUUUUUWAAA RIP-chip
Cook et al.(2011)
619_19846595.2 		0.778
ELAVL4
M314_0.6 		Homo sapiens Sequence logo not available KUUUGUUUKKUUU RIP-chip
Cook et al.(2011)
619_19846595.1 		0.778
ELAVL2
M330_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
784_7972035 		0.769
ELAVL2
M329_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
783_7972035 		0.769
ELAVL2
M328_0.6 		Homo sapiens MUYCUUUWUWUUY SELEX
Cook et al.(2011)
782_8497264 		0.769
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTBEP00000005275 RRM 38 108
ENSTBEP00000005275 RRM 124 192
ENSTBEP00000005275 RRM 283 325

Links

Other RRM family RBPs
Other Tupaia belangeri RBPs

111 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAA96943 Xenopus laevis AAA96943 I 0.765
AAA96944 Xenopus laevis AAA96944 I 0.821
AAA96945 Xenopus laevis AAA96945 I 0.775
AAH94189 Xenopus laevis AAH94189 I 0.765
AAH99348 Xenopus laevis AAH99348 I 0.775
AAI69769 Xenopus laevis AAI69769 I 0.821
AAI70539 Xenopus laevis AAI70539 I 0.765
Ame_R004766 Ailuropoda melanoleuca Ame_R004766 I 0.761
Ame_R009570 Ailuropoda melanoleuca Ame_R009570 I 0.858
Ame_R009760 Ailuropoda melanoleuca Ame_R009760 I 0.770
CAA59430 Xenopus laevis CAA59430 I 0.761
CBF67567 Xenopus laevis CBF67567 I 0.775
CBU92440 Xenopus laevis CBU92440 I 0.775
ELAVL4 Anolis carolinensis ENSACAG00000004527 I 0.770
ELAVL3 Anolis carolinensis ENSACAG00000016958 I 0.825
ELAVL2 Anolis carolinensis ENSACAG00000017521 I 0.765
ELAVL3 Bos taurus ENSBTAG00000014412 I 0.858
A2VDK5_BOVIN Bos taurus ENSBTAG00000021046 I 0.770
ELAVL2 Canis familiaris ENSCAFG00000001688 I 0.761
ELAVL4 Canis familiaris ENSCAFG00000003927 I 0.770
ELAVL3 Canis familiaris ENSCAFG00000017350 I 0.858
ELAVL4 Choloepus hoffmanni ENSCHOG00000002464 I 0.770
ELAVL2 Callithrix jacchus ENSCJAG00000008064 I 0.761
ELAVL4 Callithrix jacchus ENSCJAG00000013725 I 0.770
ENSCPOG00000002044 Cavia porcellus ENSCPOG00000002044 I 0.770
ELAVL2 Cavia porcellus ENSCPOG00000010472 I 0.761
elavl3 Danio rerio ENSDARG00000014420 I 0.829
elavl2 Danio rerio ENSDARG00000040732 I 0.746
elavl4 Danio rerio ENSDARG00000045639 I 0.767
ELAVL4 Dasypus novemcinctus ENSDNOG00000002932 I 0.770
Elavl3 Dipodomys ordii ENSDORG00000002538 I 0.839
Elavl2 Dipodomys ordii ENSDORG00000010437 I 0.761
Elavl4 Dipodomys ordii ENSDORG00000012729 I 0.770
ELAVL2 Equus caballus ENSECAG00000020142 I 0.761
LOC100056901 Equus caballus ENSECAG00000020594 I 0.928
LOC100051268 Equus caballus ENSECAG00000022284 I 0.770
ELAVL4 Erinaceus europaeus ENSEEUG00000008766 I 0.770
ELAVL2 Echinops telfairi ENSETEG00000006134 I 0.761
ELAVL2 Homo sapiens ENSG00000107105 D 0.761
ELAVL4 Homo sapiens ENSG00000162374 D 0.770
ELAVL3 Homo sapiens ENSG00000196361 I 0.858
ELAVL4 Gasterosteus aculeatus ENSGACG00000011152 I 0.770
ELAVL3 Gasterosteus aculeatus ENSGACG00000013839 I 0.829
ELAVL2 Gasterosteus aculeatus ENSGACG00000019484 I 0.751
Q9PW22_CHICK Gallus gallus ENSGALG00000010533 I 0.770
ELAVL2 Gallus gallus ENSGALG00000015799 I 0.751
ELAVL4 Gorilla gorilla ENSGGOG00000000634 I 0.770
ELAVL2 Gorilla gorilla ENSGGOG00000003678 I 0.761
ELAVL3 Gorilla gorilla ENSGGOG00000008635 I 0.858
ELAVL4 Loxodonta africana ENSLAFG00000001087 I 0.770
ELAVL3 Loxodonta africana ENSLAFG00000005013 I 0.858
ELAVL2 Loxodonta africana ENSLAFG00000009938 I 0.761
ELAVL4 Macropus eugenii ENSMEUG00000007145 I 0.770
ELAVL3 Macropus eugenii ENSMEUG00000016706 I 0.830
ELAVL4 Meleagris gallopavo ENSMGAG00000010928 I 0.770
ELAVL4 Microcebus murinus ENSMICG00000003286 I 0.770
ELAVL4 Myotis lucifugus ENSMLUG00000006226 I 0.770
ELAVL2 Myotis lucifugus ENSMLUG00000014210 I 0.756
ELAVL3 Myotis lucifugus ENSMLUG00000016320 N 0.708
LOC708195 Macaca mulatta ENSMMUG00000010038 I 0.761
ELAVL4 Macaca mulatta ENSMMUG00000021933 I 0.770
ELAVL4 Monodelphis domestica ENSMODG00000001300 I 0.770
LOC100015949 Monodelphis domestica ENSMODG00000003936 I 0.765
ELAVL3 Monodelphis domestica ENSMODG00000006653 I 0.801
Elavl3 Mus musculus ENSMUSG00000003410 I 0.848
Elavl2 Mus musculus ENSMUSG00000008489 I 0.761
Elavl4 Mus musculus ENSMUSG00000028546 I 0.770
ELAVL2 Oryctolagus cuniculus ENSOCUG00000005891 I 0.761
ELAVL4 Oryctolagus cuniculus ENSOCUG00000016262 I 0.770
ELAVL3 Otolemur garnettii ENSOGAG00000007072 I 0.858
ELAVL4 Otolemur garnettii ENSOGAG00000016990 I 0.770
ELAVL2 Ochotona princeps ENSOPRG00000012874 I 0.761
ELAVL4 Ochotona princeps ENSOPRG00000015300 I 0.770
ELAVL2 Oryzias latipes ENSORLG00000004217 I 0.759
ELAVL3 Oryzias latipes ENSORLG00000005379 I 0.822
ELAVL4 Oryzias latipes ENSORLG00000017130 I 0.770
ELAVL4 Procavia capensis ENSPCAG00000008215 I 0.770
ELAVL2 Procavia capensis ENSPCAG00000014998 I 0.716
ENSPPYG00000001367 Pongo pygmaeus ENSPPYG00000001367 I 0.770
ENSPPYG00000019166 Pongo pygmaeus ENSPPYG00000019166 I 0.761
ELAVL4 Pan troglodytes ENSPTRG00000000723 I 0.770
ELAVL3 Pan troglodytes ENSPTRG00000010506 I 0.829
ELAVL2 Pan troglodytes ENSPTRG00000020830 I 0.761
ELAVL2 Pteropus vampyrus ENSPVAG00000002688 I 0.761
ELAVL4 Pteropus vampyrus ENSPVAG00000003632 I 0.711
ELAVL3 Pteropus vampyrus ENSPVAG00000014893 I 0.858
Elavl2 Rattus norvegicus ENSRNOG00000006853 I 0.761
Elavl3 Rattus norvegicus ENSRNOG00000013752 I 0.848
Elavl4 Rattus norvegicus ENSRNOG00000023601 I 0.770
ELAVL2 Sorex araneus ENSSARG00000005702 I 0.761
ELAVL4 Sorex araneus ENSSARG00000010733 I 0.770
ELAVL2 Sus scrofa ENSSSCG00000005130 I 0.761
ELAVL3 Sus scrofa ENSSSCG00000013617 I 0.858
ELAVL2 Taeniopygia guttata ENSTGUG00000001349 I 0.742
ELAVL4 Taeniopygia guttata ENSTGUG00000008597 I 0.770
ELAVL2 Tetraodon nigroviridis ENSTNIG00000011312 I 0.751
ELAVL4 Tetraodon nigroviridis ENSTNIG00000015485 I 0.765
ELAVL3 Tetraodon nigroviridis ENSTNIG00000018572 I 0.818
ELAVL4 Takifugu rubripes ENSTRUG00000000523 I 0.765
ELAVL2 Takifugu rubripes ENSTRUG00000007867 I 0.755
ELAVL3 Takifugu rubripes ENSTRUG00000010719 I 0.829
ELAVL4 Tarsius syrichta ENSTSYG00000004130 I 0.770
ELAVL2 Tarsius syrichta ENSTSYG00000013066 I 0.749
ELAVL3 Tursiops truncatus ENSTTRG00000001789 I 0.858
ELAVL2 Tursiops truncatus ENSTTRG00000011656 I 0.756
ELAVL2 Vicugna pacos ENSVPAG00000005109 I 0.761
ELAVL4 Vicugna pacos ENSVPAG00000011606 I 0.770
elavl4 Xenopus tropicalis ENSXETG00000008680 I 0.775
elavl3 Xenopus tropicalis ENSXETG00000016741 I 0.817
Q91584 Xenopus laevis Q91584 I 0.821
Q91903 Xenopus laevis Q91903 I 0.765