ELAVL2 (Taeniopygia guttata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTGUG00000001349 T41852_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL2
M330_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
784_7972035 		0.962
ELAVL2
M329_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
783_7972035 		0.962
ELAVL2
M328_0.6 		Homo sapiens MUYCUUUWUWUUY SELEX
Cook et al.(2011)
782_8497264 		0.962
ELAVL4
M315_0.6 		Homo sapiens Sequence logo not available UUUUUUUUUWAAA RIP-chip
Cook et al.(2011)
619_19846595.2 		0.929
ELAVL4
M314_0.6 		Homo sapiens Sequence logo not available KUUUGUUUKKUUU RIP-chip
Cook et al.(2011)
619_19846595.1 		0.929
ELAVL4
M313_0.6 		Homo sapiens Sequence logo not available CYCUCCYUCYCYC RIP-chip
Cook et al.(2011)
619_19846595 		0.929
ELAVL1
M327_0.6 		Homo sapiens Sequence logo not available KKNWWDNNNUKNNUUNUNNH RIP-chip
Cook et al.(2011)
714_14981256 		0.778
ELAVL1
M112_0.6 		Homo sapiens UUURKUU RNAcompete
Ray et al.(2013)
RNCMPT00117 		0.778
ELAVL1
M232_0.6 		Homo sapiens UUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00274 		0.778
ELAVL1
M108_0.6 		Homo sapiens UUWGUUU RNAcompete
Ray et al.(2013)
RNCMPT00112 		0.778
ELAVL1
M127_0.6 		Homo sapiens UUKRUUU RNAcompete
Ray et al.(2013)
RNCMPT00136 		0.778
ELAVL1
M031_0.6 		Homo sapiens UUDUUUU RNAcompete
Ray et al.(2013)
RNCMPT00032 		0.778
Rbp9
M124_0.6 		Drosophila melanogaster UUDDGUU RNAcompete
Ray et al.(2013)
RNCMPT00132 		0.713
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000001397 RRM 44 114
ENSTGUP00000001397 RRM 130 198
ENSTGUP00000001397 RRM 288 358

Links

Other RRM family RBPs
Other Taeniopygia guttata RBPs

191 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAI70539 Xenopus laevis AAI70539 I 0.967
AAH94189 Xenopus laevis AAH94189 I 0.967
LOC100015949 Monodelphis domestica ENSMODG00000003936 I 0.967
ELAVL2 Anolis carolinensis ENSACAG00000017521 I 0.967
Q91903 Xenopus laevis Q91903 I 0.962
AAA96943 Xenopus laevis AAA96943 I 0.962
ELAVL2 Echinops telfairi ENSETEG00000006134 I 0.962
ELAVL2 Homo sapiens ENSG00000107105 D 0.962
Elavl2 Dipodomys ordii ENSDORG00000010437 I 0.962
ELAVL2 Canis familiaris ENSCAFG00000001688 I 0.962
ELAVL2 Gorilla gorilla ENSGGOG00000003678 I 0.962
ELAVL2 Callithrix jacchus ENSCJAG00000008064 I 0.962
ELAVL2 Cavia porcellus ENSCPOG00000010472 I 0.962
ELAVL2 Loxodonta africana ENSLAFG00000009938 I 0.962
ELAVL2 Pteropus vampyrus ENSPVAG00000002688 I 0.962
Elavl2 Rattus norvegicus ENSRNOG00000006853 I 0.962
ELAVL2 Sorex araneus ENSSARG00000005702 I 0.962
ELAVL2 Sus scrofa ENSSSCG00000005130 I 0.962
ELAVL2 Pan troglodytes ENSPTRG00000020830 I 0.962
ENSPPYG00000019166 Pongo pygmaeus ENSPPYG00000019166 I 0.962
LOC708195 Macaca mulatta ENSMMUG00000010038 I 0.962
Elavl2 Mus musculus ENSMUSG00000008489 I 0.962
ELAVL2 Oryctolagus cuniculus ENSOCUG00000005891 I 0.962
ELAVL2 Ochotona princeps ENSOPRG00000012874 I 0.962
Ame_R004766 Ailuropoda melanoleuca Ame_R004766 I 0.962
ELAVL2 Equus caballus ENSECAG00000020142 I 0.962
ELAVL2 Vicugna pacos ENSVPAG00000005109 I 0.962
CAA59430 Xenopus laevis CAA59430 I 0.958
ELAVL2 Tursiops truncatus ENSTTRG00000011656 I 0.957
ELAVL2 Myotis lucifugus ENSMLUG00000014210 I 0.957
ELAVL2 Gasterosteus aculeatus ENSGACG00000019484 I 0.953
ELAVL2 Oryzias latipes ENSORLG00000004217 I 0.953
ELAVL2 Tetraodon nigroviridis ENSTNIG00000011312 I 0.953
ELAVL2 Gallus gallus ENSGALG00000015799 I 0.948
ELAVL2 Takifugu rubripes ENSTRUG00000007867 I 0.939
elavl2 Danio rerio ENSDARG00000040732 I 0.934
A2VDK5_BOVIN Bos taurus ENSBTAG00000021046 I 0.929
ELAVL4 Dasypus novemcinctus ENSDNOG00000002932 I 0.929
ELAVL4 Gorilla gorilla ENSGGOG00000000634 I 0.929
ELAVL4 Loxodonta africana ENSLAFG00000001087 I 0.929
ELAVL4 Macropus eugenii ENSMEUG00000007145 I 0.929
Q9PW22_CHICK Gallus gallus ENSGALG00000010533 I 0.929
ELAVL4 Canis familiaris ENSCAFG00000003927 I 0.929
ELAVL4 Vicugna pacos ENSVPAG00000011606 I 0.929
ELAVL4 Erinaceus europaeus ENSEEUG00000008766 I 0.929
LOC100051268 Equus caballus ENSECAG00000022284 I 0.929
ELAVL4 Taeniopygia guttata ENSTGUG00000008597 I 0.929
ELAVL4 Sorex araneus ENSSARG00000010733 I 0.929
ELAVL4 Homo sapiens ENSG00000162374 D 0.929
Elavl4 Dipodomys ordii ENSDORG00000012729 I 0.929
ELAVL4 Anolis carolinensis ENSACAG00000004527 I 0.929
ELAVL4 Microcebus murinus ENSMICG00000003286 I 0.929
ELAVL4 Ochotona princeps ENSOPRG00000015300 I 0.929
ELAVL4 Otolemur garnettii ENSOGAG00000016990 I 0.929
ELAVL4 Oryctolagus cuniculus ENSOCUG00000016262 I 0.929
ELAVL4 Callithrix jacchus ENSCJAG00000013725 I 0.929
ELAVL4 Procavia capensis ENSPCAG00000008215 I 0.929
Elavl4 Rattus norvegicus ENSRNOG00000023601 I 0.929
ELAVL4 Pan troglodytes ENSPTRG00000000723 I 0.929
ENSPPYG00000001367 Pongo pygmaeus ENSPPYG00000001367 I 0.929
Ame_R009760 Ailuropoda melanoleuca Ame_R009760 I 0.929
Elavl4 Mus musculus ENSMUSG00000028546 I 0.929
ELAVL4 Macaca mulatta ENSMMUG00000021933 I 0.929
ELAVL4 Myotis lucifugus ENSMLUG00000006226 I 0.929
ELAVL4 Choloepus hoffmanni ENSCHOG00000002464 I 0.929
ENSCPOG00000002044 Cavia porcellus ENSCPOG00000002044 I 0.929
ELAVL4 Tarsius syrichta ENSTSYG00000004130 I 0.929
ELAVL4 Monodelphis domestica ENSMODG00000001300 I 0.929
ELAVL4 Meleagris gallopavo ENSMGAG00000010928 I 0.925
elavl4 Xenopus tropicalis ENSXETG00000008680 I 0.924
CBF67567 Xenopus laevis CBF67567 I 0.924
AAA96945 Xenopus laevis AAA96945 I 0.924
AAH99348 Xenopus laevis AAH99348 I 0.924
CBU92440 Xenopus laevis CBU92440 I 0.924
ELAVL4 Oryzias latipes ENSORLG00000017130 I 0.919
ELAVL4 Gasterosteus aculeatus ENSGACG00000011152 I 0.919
ELAVL4 Tetraodon nigroviridis ENSTNIG00000015485 I 0.915
ELAVL4 Takifugu rubripes ENSTRUG00000000523 I 0.915
ELAVL2 Tarsius syrichta ENSTSYG00000013066 I 0.911
elavl4 Danio rerio ENSDARG00000045639 I 0.907
ELAVL3 Macropus eugenii ENSMEUG00000016706 I 0.892
AAA96944 Xenopus laevis AAA96944 I 0.892
AAI69769 Xenopus laevis AAI69769 I 0.892
Q91584 Xenopus laevis Q91584 I 0.892
ELAVL2 Procavia capensis ENSPCAG00000014998 I 0.887
ELAVL3 Anolis carolinensis ENSACAG00000016958 I 0.887
elavl3 Xenopus tropicalis ENSXETG00000016741 I 0.884
ELAVL3 Gasterosteus aculeatus ENSGACG00000013839 I 0.883
elavl3 Danio rerio ENSDARG00000014420 I 0.883
ELAVL3 Takifugu rubripes ENSTRUG00000010719 I 0.883
ELAVL3 Pteropus vampyrus ENSPVAG00000014893 I 0.878
ELAVL3 Otolemur garnettii ENSOGAG00000007072 I 0.878
ELAVL3 Canis familiaris ENSCAFG00000017350 I 0.878
ELAVL3 Loxodonta africana ENSLAFG00000005013 I 0.878
Ame_R009570 Ailuropoda melanoleuca Ame_R009570 I 0.878
ELAVL3 Gorilla gorilla ENSGGOG00000008635 I 0.878
ELAVL3 Tursiops truncatus ENSTTRG00000001789 I 0.878
ELAVL3 Homo sapiens ENSG00000196361 I 0.878
ELAVL3 Bos taurus ENSBTAG00000014412 I 0.878
ELAVL3 Sus scrofa ENSSSCG00000013617 I 0.878
ELAVL3 Oryzias latipes ENSORLG00000005379 I 0.874
ELAVL3 Tetraodon nigroviridis ENSTNIG00000018572 I 0.874
Elavl3 Rattus norvegicus ENSRNOG00000013752 I 0.869
Elavl3 Dipodomys ordii ENSDORG00000002538 I 0.869
Elavl3 Mus musculus ENSMUSG00000003410 I 0.869
ELAVL3 Monodelphis domestica ENSMODG00000006653 I 0.864
ELAVL3 Pan troglodytes ENSPTRG00000010506 I 0.859
ELAVL2 Ornithorhynchus anatinus ENSOANG00000009634 I 0.859
ELAVL4 Pteropus vampyrus ENSPVAG00000003632 I 0.840
ELAVL2 Choloepus hoffmanni ENSCHOG00000000635 I 0.807
ELAVL2 Macropus eugenii ENSMEUG00000006499 I 0.803
ELAVL2 Otolemur garnettii ENSOGAG00000016228 I 0.802
LOC100056901 Equus caballus ENSECAG00000020594 I 0.798
elavl2 Xenopus tropicalis ENSXETG00000009387 I 0.796
ELAVL2 Erinaceus europaeus ENSEEUG00000008733 I 0.792
ELAVL2 Dasypus novemcinctus ENSDNOG00000016605 I 0.792
hug Danio rerio ENSDARG00000016405 I 0.789
D7R608_RABIT Oryctolagus cuniculus ENSOCUG00000015871 I 0.788
ELAVL1 Ochotona princeps ENSOPRG00000009691 I 0.788
ELAVL1 Oryzias latipes ENSORLG00000012435 I 0.788
ELAVL1 Myotis lucifugus ENSMLUG00000008101 I 0.783
ELAVL1 Sus scrofa ENSSSCG00000013592 I 0.783
LOC100060819 Equus caballus ENSECAG00000019459 I 0.783
ELAVL1 Gasterosteus aculeatus ENSGACG00000010657 I 0.781
Elavl1 Mus musculus ENSMUSG00000040028 I 0.778
ELAVL1 Monodelphis domestica ENSMODG00000005041 I 0.778
ENSPPYG00000009496 Pongo pygmaeus ENSPPYG00000009496 I 0.778
AAA96942 Xenopus laevis AAA96942 I 0.778
ELAVL1 Tarsius syrichta ENSTSYG00000008248 I 0.778
ELAVL1 Macaca mulatta ENSMMUG00000006544 I 0.778
ELAVL1 Otolemur garnettii ENSOGAG00000012877 I 0.778
Elavl1 Rattus norvegicus ENSRNOG00000001069 I 0.778
ELAVL1 Homo sapiens ENSG00000066044 D 0.778
ELAVL1 Felis catus ENSFCAG00000014947 I 0.778
Elavl1 Dipodomys ordii ENSDORG00000009158 I 0.778
ELAVL1 Microcebus murinus ENSMICG00000009699 I 0.778
ELAVL1 Gorilla gorilla ENSGGOG00000006100 I 0.778
ENSCAFG00000018353 Canis familiaris ENSCAFG00000018353 I 0.778
ELAVL1 Loxodonta africana ENSLAFG00000004219 I 0.778
Ame_R010167 Ailuropoda melanoleuca Ame_R010167 I 0.778
ELAVL1 Pan troglodytes ENSPTRG00000010413 I 0.778
ELAVL1 Dasypus novemcinctus ENSDNOG00000008797 I 0.777
Q5U259 Xenopus laevis Q5U259 I 0.774
ELAVL1 Meleagris gallopavo ENSMGAG00000001015 I 0.774
ELAVL4 Echinops telfairi ENSETEG00000013779 I 0.774
ELAVL4 Tupaia belangeri ENSTBEG00000011730 I 0.774
ELAVL1 Taeniopygia guttata ENSTGUG00000000118 I 0.774
AAH86269 Xenopus laevis AAH86269 I 0.774
Q3ZCE2_BOVIN Bos taurus ENSBTAG00000000613 I 0.774
Q9PW24_CHICK Gallus gallus ENSGALG00000000726 I 0.774
elavl1 Danio rerio ENSDARG00000038695 I 0.770
elavl1 Xenopus tropicalis ENSXETG00000008752 I 0.769
fgenesh2_pg.scaffold_219000066 Branchiostoma floridae fgenesh2_pg.scaffold_219000066 I 0.765
ELAVL4 Spermophilus tridecemlineatus ENSSTOG00000002834 I 0.765
ELAVL1 Spermophilus tridecemlineatus ENSSTOG00000009130 I 0.764
ELAVL1 Tetraodon nigroviridis ENSTNIG00000019823 I 0.756
ELAVL2 Microcebus murinus ENSMICG00000001558 I 0.751
nasonia_NCBI_hmm330804 Nasonia vitripennis nasonia_NCBI_hmm330804 I 0.750
ELAVL2 Tupaia belangeri ENSTBEG00000017759 I 0.746
ELAVL1 Takifugu rubripes ENSTRUG00000004559 I 0.746
amel4_ncbi_hmm5219 Apis mellifera amel4_ncbi_hmm5219 I 0.745
ELAVL3 Tupaia belangeri ENSTBEG00000006133 I 0.742
ELAVL3 Sorex araneus ENSSARG00000005949 I 0.742
ENSCPOG00000022816 Cavia porcellus ENSCPOG00000022816 I 0.741
AAI16460 Xenopus laevis AAI16460 I 0.740
Q1JQ73 Xenopus laevis Q1JQ73 I 0.740
ELAVL1 Gasterosteus aculeatus ENSGACG00000013329 I 0.737
fgenesh2_pg.C_sca_14000012 Lottia gigantea fgenesh2_pg.C_sca_14000012 I 0.736
ELAVL2 Spermophilus tridecemlineatus ENSSTOG00000007792 I 0.732
AGAP000965 Anopheles gambiae AGAP000965 I 0.731
CPIJ016143 Culex quinquefasciatus CPIJ016143 I 0.728
ELAVL1 Takifugu rubripes ENSTRUG00000007296 I 0.728
CpipJ_CPIJ016143 Culex pipiens CpipJ_CPIJ016143 I 0.728
Rbp9 Drosophila melanogaster FBgn0010263 D 0.726
ELAVL1 Oryzias latipes ENSORLG00000000087 I 0.723
GL26299 Drosophila persimilis FBgn0163881 I 0.722
fgenesh1_pg.C_scaffold_8000205 Daphnia pulex fgenesh1_pg.C_scaffold_8000205 I 0.718
GH13638 Drosophila grimshawi FBgn0121114 I 0.717
ENSMODG00000003850 Monodelphis domestica ENSMODG00000003850 I 0.715
ENSCSAVG00000003440 Ciona savignyi ENSCSAVG00000003440 I 0.709
GM18380 Drosophila sechellia FBgn0173287 I 0.708
GG24901 Drosophila erecta FBgn0117030 I 0.708
GJ13991 Drosophila virilis FBgn0201209 I 0.708
GI11879 Drosophila mojavensis FBgn0134637 I 0.708
GA28809-RA Drosophila pseudoobscura FBgn0250168 I 0.708
GE18193 Drosophila yakuba FBgn0235624 I 0.708
GK14865 Drosophila willistoni FBgn0216870 I 0.708
GF14992 Drosophila ananassae FBgn0092017 I 0.708
estExt_Genewise1Plus.C_1660036 Capitella teleta estExt_Genewise1Plus.C_1660036 I 0.704
CPIJ000395 Culex quinquefasciatus CPIJ000395 I 0.701
CpipJ_CPIJ000395 Culex pipiens CpipJ_CPIJ000395 I 0.701