ELAVL2 (Sus scrofa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSSCG00000005130 T41421_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL2
M330_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
784_7972035 		1.000
ELAVL2
M329_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
783_7972035 		1.000
ELAVL2
M328_0.6 		Homo sapiens MUYCUUUWUWUUY SELEX
Cook et al.(2011)
782_8497264 		1.000
ELAVL4
M315_0.6 		Homo sapiens Sequence logo not available UUUUUUUUUWAAA RIP-chip
Cook et al.(2011)
619_19846595.2 		0.957
ELAVL4
M314_0.6 		Homo sapiens Sequence logo not available KUUUGUUUKKUUU RIP-chip
Cook et al.(2011)
619_19846595.1 		0.957
ELAVL4
M313_0.6 		Homo sapiens Sequence logo not available CYCUCCYUCYCYC RIP-chip
Cook et al.(2011)
619_19846595 		0.957
ELAVL1
M327_0.6 		Homo sapiens Sequence logo not available KKNWWDNNNUKNNUUNUNNH RIP-chip
Cook et al.(2011)
714_14981256 		0.797
ELAVL1
M112_0.6 		Homo sapiens UUURKUU RNAcompete
Ray et al.(2013)
RNCMPT00117 		0.797
ELAVL1
M232_0.6 		Homo sapiens UUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00274 		0.797
ELAVL1
M108_0.6 		Homo sapiens UUWGUUU RNAcompete
Ray et al.(2013)
RNCMPT00112 		0.797
ELAVL1
M127_0.6 		Homo sapiens UUKRUUU RNAcompete
Ray et al.(2013)
RNCMPT00136 		0.797
ELAVL1
M031_0.6 		Homo sapiens UUDUUUU RNAcompete
Ray et al.(2013)
RNCMPT00032 		0.797
Rbp9
M124_0.6 		Drosophila melanogaster UUDDGUU RNAcompete
Ray et al.(2013)
RNCMPT00132 		0.727
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000005515 RRM 41 111
ENSSSCP00000005515 RRM 127 195
ENSSSCP00000005515 RRM 266 336

Links

Other RRM family RBPs
Other Sus scrofa RBPs

191 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ELAVL2 Vicugna pacos ENSVPAG00000005109 I 1.000
LOC708195 Macaca mulatta ENSMMUG00000010038 I 1.000
ELAVL2 Callithrix jacchus ENSCJAG00000008064 I 1.000
ELAVL2 Equus caballus ENSECAG00000020142 I 1.000
ELAVL2 Ochotona princeps ENSOPRG00000012874 I 1.000
ELAVL2 Oryctolagus cuniculus ENSOCUG00000005891 I 1.000
ELAVL2 Loxodonta africana ENSLAFG00000009938 I 1.000
ELAVL2 Cavia porcellus ENSCPOG00000010472 I 1.000
ELAVL2 Homo sapiens ENSG00000107105 D 1.000
ELAVL2 Echinops telfairi ENSETEG00000006134 I 1.000
Ame_R004766 Ailuropoda melanoleuca Ame_R004766 I 1.000
Elavl2 Dipodomys ordii ENSDORG00000010437 I 1.000
ELAVL2 Gorilla gorilla ENSGGOG00000003678 I 1.000
ELAVL2 Canis familiaris ENSCAFG00000001688 I 1.000
Elavl2 Mus musculus ENSMUSG00000008489 I 1.000
ELAVL2 Pan troglodytes ENSPTRG00000020830 I 1.000
ENSPPYG00000019166 Pongo pygmaeus ENSPPYG00000019166 I 1.000
ELAVL2 Pteropus vampyrus ENSPVAG00000002688 I 1.000
Elavl2 Rattus norvegicus ENSRNOG00000006853 I 1.000
ELAVL2 Sorex araneus ENSSARG00000005702 I 1.000
ELAVL2 Tursiops truncatus ENSTTRG00000011656 I 0.995
ELAVL2 Anolis carolinensis ENSACAG00000017521 I 0.995
AAI70539 Xenopus laevis AAI70539 I 0.995
ELAVL2 Myotis lucifugus ENSMLUG00000014210 I 0.995
AAH94189 Xenopus laevis AAH94189 I 0.995
LOC100015949 Monodelphis domestica ENSMODG00000003936 I 0.995
Q91903 Xenopus laevis Q91903 I 0.991
AAA96943 Xenopus laevis AAA96943 I 0.991
CAA59430 Xenopus laevis CAA59430 I 0.986
ELAVL2 Oryzias latipes ENSORLG00000004217 I 0.972
ELAVL2 Gasterosteus aculeatus ENSGACG00000019484 I 0.972
ELAVL2 Gallus gallus ENSGALG00000015799 I 0.972
ELAVL2 Tetraodon nigroviridis ENSTNIG00000011312 I 0.972
ELAVL2 Taeniopygia guttata ENSTGUG00000001349 I 0.962
ELAVL2 Takifugu rubripes ENSTRUG00000007867 I 0.958
ELAVL4 Anolis carolinensis ENSACAG00000004527 I 0.957
Elavl4 Dipodomys ordii ENSDORG00000012729 I 0.957
ELAVL4 Canis familiaris ENSCAFG00000003927 I 0.957
ELAVL4 Choloepus hoffmanni ENSCHOG00000002464 I 0.957
ELAVL4 Callithrix jacchus ENSCJAG00000013725 I 0.957
ENSCPOG00000002044 Cavia porcellus ENSCPOG00000002044 I 0.957
A2VDK5_BOVIN Bos taurus ENSBTAG00000021046 I 0.957
ELAVL4 Dasypus novemcinctus ENSDNOG00000002932 I 0.957
ELAVL4 Macropus eugenii ENSMEUG00000007145 I 0.957
ELAVL4 Ochotona princeps ENSOPRG00000015300 I 0.957
ELAVL4 Otolemur garnettii ENSOGAG00000016990 I 0.957
ELAVL4 Oryctolagus cuniculus ENSOCUG00000016262 I 0.957
ELAVL4 Procavia capensis ENSPCAG00000008215 I 0.957
ENSPPYG00000001367 Pongo pygmaeus ENSPPYG00000001367 I 0.957
ELAVL4 Sorex araneus ENSSARG00000010733 I 0.957
Elavl4 Rattus norvegicus ENSRNOG00000023601 I 0.957
ELAVL4 Pan troglodytes ENSPTRG00000000723 I 0.957
Elavl4 Mus musculus ENSMUSG00000028546 I 0.957
ELAVL4 Monodelphis domestica ENSMODG00000001300 I 0.957
Q9PW22_CHICK Gallus gallus ENSGALG00000010533 I 0.957
ELAVL4 Homo sapiens ENSG00000162374 D 0.957
ELAVL4 Erinaceus europaeus ENSEEUG00000008766 I 0.957
ELAVL4 Gorilla gorilla ENSGGOG00000000634 I 0.957
ELAVL4 Loxodonta africana ENSLAFG00000001087 I 0.957
ELAVL4 Macaca mulatta ENSMMUG00000021933 I 0.957
ELAVL4 Myotis lucifugus ENSMLUG00000006226 I 0.957
ELAVL4 Microcebus murinus ENSMICG00000003286 I 0.957
LOC100051268 Equus caballus ENSECAG00000022284 I 0.957
elavl2 Danio rerio ENSDARG00000040732 I 0.957
ELAVL4 Vicugna pacos ENSVPAG00000011606 I 0.957
Ame_R009760 Ailuropoda melanoleuca Ame_R009760 I 0.957
ELAVL4 Tarsius syrichta ENSTSYG00000004130 I 0.957
ELAVL4 Taeniopygia guttata ENSTGUG00000008597 I 0.957
ELAVL4 Meleagris gallopavo ENSMGAG00000010928 I 0.953
ELAVL4 Gasterosteus aculeatus ENSGACG00000011152 I 0.953
ELAVL4 Oryzias latipes ENSORLG00000017130 I 0.953
AAA96945 Xenopus laevis AAA96945 I 0.953
AAH99348 Xenopus laevis AAH99348 I 0.953
CBU92440 Xenopus laevis CBU92440 I 0.953
CBF67567 Xenopus laevis CBF67567 I 0.953
elavl4 Xenopus tropicalis ENSXETG00000008680 I 0.953
ELAVL2 Tarsius syrichta ENSTSYG00000013066 I 0.948
ELAVL4 Tetraodon nigroviridis ENSTNIG00000015485 I 0.948
ELAVL4 Takifugu rubripes ENSTRUG00000000523 I 0.948
elavl4 Danio rerio ENSDARG00000045639 I 0.939
ELAVL2 Procavia capensis ENSPCAG00000014998 I 0.915
ELAVL3 Takifugu rubripes ENSTRUG00000010719 I 0.906
AAA96944 Xenopus laevis AAA96944 I 0.906
Q91584 Xenopus laevis Q91584 I 0.906
elavl3 Danio rerio ENSDARG00000014420 I 0.906
ELAVL3 Macropus eugenii ENSMEUG00000016706 I 0.906
AAI69769 Xenopus laevis AAI69769 I 0.906
ELAVL3 Gasterosteus aculeatus ENSGACG00000013839 I 0.906
ELAVL3 Anolis carolinensis ENSACAG00000016958 I 0.901
ELAVL3 Tetraodon nigroviridis ENSTNIG00000018572 I 0.898
ELAVL3 Oryzias latipes ENSORLG00000005379 I 0.898
elavl3 Xenopus tropicalis ENSXETG00000016741 I 0.898
ELAVL3 Loxodonta africana ENSLAFG00000005013 I 0.897
ELAVL3 Tursiops truncatus ENSTTRG00000001789 I 0.897
ELAVL3 Pteropus vampyrus ENSPVAG00000014893 I 0.897
ELAVL3 Sus scrofa ENSSSCG00000013617 I 0.897
ELAVL3 Homo sapiens ENSG00000196361 I 0.897
Ame_R009570 Ailuropoda melanoleuca Ame_R009570 I 0.897
ELAVL3 Otolemur garnettii ENSOGAG00000007072 I 0.897
ELAVL3 Bos taurus ENSBTAG00000014412 I 0.897
ELAVL3 Canis familiaris ENSCAFG00000017350 I 0.897
ELAVL3 Gorilla gorilla ENSGGOG00000008635 I 0.897
Elavl3 Mus musculus ENSMUSG00000003410 I 0.887
Elavl3 Dipodomys ordii ENSDORG00000002538 I 0.887
Elavl3 Rattus norvegicus ENSRNOG00000013752 I 0.887
ELAVL3 Pan troglodytes ENSPTRG00000010506 I 0.878
ELAVL3 Monodelphis domestica ENSMODG00000006653 I 0.869
ELAVL4 Pteropus vampyrus ENSPVAG00000003632 I 0.869
ELAVL2 Ornithorhynchus anatinus ENSOANG00000009634 I 0.869
ELAVL2 Choloepus hoffmanni ENSCHOG00000000635 I 0.840
ELAVL2 Otolemur garnettii ENSOGAG00000016228 I 0.835
elavl2 Xenopus tropicalis ENSXETG00000009387 I 0.825
ELAVL2 Erinaceus europaeus ENSEEUG00000008733 I 0.821
ELAVL2 Dasypus novemcinctus ENSDNOG00000016605 I 0.821
LOC100056901 Equus caballus ENSECAG00000020594 I 0.817
ELAVL1 Oryzias latipes ENSORLG00000012435 I 0.811
ELAVL2 Macropus eugenii ENSMEUG00000006499 I 0.808
hug Danio rerio ENSDARG00000016405 I 0.808
ELAVL1 Ochotona princeps ENSOPRG00000009691 I 0.807
ELAVL4 Echinops telfairi ENSETEG00000013779 I 0.807
ELAVL4 Tupaia belangeri ENSTBEG00000011730 I 0.807
D7R608_RABIT Oryctolagus cuniculus ENSOCUG00000015871 I 0.807
ELAVL1 Sus scrofa ENSSSCG00000013592 I 0.802
ELAVL1 Myotis lucifugus ENSMLUG00000008101 I 0.802
ELAVL1 Pan troglodytes ENSPTRG00000010413 I 0.797
ELAVL1 Tarsius syrichta ENSTSYG00000008248 I 0.797
Elavl1 Rattus norvegicus ENSRNOG00000001069 I 0.797
ENSPPYG00000009496 Pongo pygmaeus ENSPPYG00000009496 I 0.797
Elavl1 Mus musculus ENSMUSG00000040028 I 0.797
ELAVL1 Monodelphis domestica ENSMODG00000005041 I 0.797
ELAVL1 Otolemur garnettii ENSOGAG00000012877 I 0.797
ELAVL1 Microcebus murinus ENSMICG00000009699 I 0.797
ELAVL1 Macaca mulatta ENSMMUG00000006544 I 0.797
ELAVL1 Gorilla gorilla ENSGGOG00000006100 I 0.797
ELAVL1 Felis catus ENSFCAG00000014947 I 0.797
Ame_R010167 Ailuropoda melanoleuca Ame_R010167 I 0.797
ENSCAFG00000018353 Canis familiaris ENSCAFG00000018353 I 0.797
ELAVL1 Homo sapiens ENSG00000066044 D 0.797
Elavl1 Dipodomys ordii ENSDORG00000009158 I 0.797
ELAVL1 Loxodonta africana ENSLAFG00000004219 I 0.797
ELAVL1 Dasypus novemcinctus ENSDNOG00000008797 I 0.796
ELAVL1 Gasterosteus aculeatus ENSGACG00000010657 I 0.795
elavl1 Danio rerio ENSDARG00000038695 I 0.793
LOC100060819 Equus caballus ENSECAG00000019459 I 0.792
AAA96942 Xenopus laevis AAA96942 I 0.792
ELAVL1 Meleagris gallopavo ENSMGAG00000001015 I 0.792
elavl1 Xenopus tropicalis ENSXETG00000008752 I 0.792
ELAVL1 Taeniopygia guttata ENSTGUG00000000118 I 0.792
Q3ZCE2_BOVIN Bos taurus ENSBTAG00000000613 I 0.792
Q9PW24_CHICK Gallus gallus ENSGALG00000000726 I 0.792
ELAVL2 Microcebus murinus ENSMICG00000001558 I 0.789
AAH86269 Xenopus laevis AAH86269 I 0.788
Q5U259 Xenopus laevis Q5U259 I 0.788
fgenesh2_pg.scaffold_219000066 Branchiostoma floridae fgenesh2_pg.scaffold_219000066 I 0.784
ELAVL1 Spermophilus tridecemlineatus ENSSTOG00000009130 I 0.783
nasonia_NCBI_hmm330804 Nasonia vitripennis nasonia_NCBI_hmm330804 I 0.774
ELAVL2 Spermophilus tridecemlineatus ENSSTOG00000007792 I 0.770
ELAVL4 Spermophilus tridecemlineatus ENSSTOG00000002834 I 0.770
ELAVL1 Tetraodon nigroviridis ENSTNIG00000019823 I 0.770
amel4_ncbi_hmm5219 Apis mellifera amel4_ncbi_hmm5219 I 0.769
ELAVL1 Takifugu rubripes ENSTRUG00000004559 I 0.765
ELAVL3 Tupaia belangeri ENSTBEG00000006133 I 0.761
ELAVL2 Tupaia belangeri ENSTBEG00000017759 I 0.761
ENSCPOG00000022816 Cavia porcellus ENSCPOG00000022816 I 0.759
fgenesh2_pg.C_sca_14000012 Lottia gigantea fgenesh2_pg.C_sca_14000012 I 0.755
Q1JQ73 Xenopus laevis Q1JQ73 I 0.753
AAI16460 Xenopus laevis AAI16460 I 0.753
AGAP000965 Anopheles gambiae AGAP000965 I 0.750
CpipJ_CPIJ016143 Culex pipiens CpipJ_CPIJ016143 I 0.746
ELAVL3 Sorex araneus ENSSARG00000005949 I 0.746
CPIJ016143 Culex quinquefasciatus CPIJ016143 I 0.746
fgenesh1_pg.C_scaffold_8000205 Daphnia pulex fgenesh1_pg.C_scaffold_8000205 I 0.742
ELAVL1 Gasterosteus aculeatus ENSGACG00000013329 I 0.742
Rbp9 Drosophila melanogaster FBgn0010263 D 0.741
ELAVL1 Oryzias latipes ENSORLG00000000087 I 0.737
GL26299 Drosophila persimilis FBgn0163881 I 0.736
ELAVL1 Takifugu rubripes ENSTRUG00000007296 I 0.732
GH13638 Drosophila grimshawi FBgn0121114 I 0.731
ENSMODG00000003850 Monodelphis domestica ENSMODG00000003850 I 0.729
ENSCSAVG00000003440 Ciona savignyi ENSCSAVG00000003440 I 0.728
estExt_Genewise1Plus.C_1660036 Capitella teleta estExt_Genewise1Plus.C_1660036 I 0.723
GJ13991 Drosophila virilis FBgn0201209 I 0.722
GM18380 Drosophila sechellia FBgn0173287 I 0.722
GA28809-RA Drosophila pseudoobscura FBgn0250168 I 0.722
GI11879 Drosophila mojavensis FBgn0134637 I 0.722
GG24901 Drosophila erecta FBgn0117030 I 0.722
GK14865 Drosophila willistoni FBgn0216870 I 0.722
GE18193 Drosophila yakuba FBgn0235624 I 0.722
GF14992 Drosophila ananassae FBgn0092017 I 0.722
CPIJ000395 Culex quinquefasciatus CPIJ000395 I 0.719
CpipJ_CPIJ000395 Culex pipiens CpipJ_CPIJ000395 I 0.719