CELF3 (Tetraodon nigroviridis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTNIG00000001919 T42008_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
aret_CONSTRUCT
M229_0.6 		RNAcompete CONSTRUCTS UKUGUGU RNAcompete
Ray et al.(2013)
RNCMPT00270 		0.761
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000004304 RRM 87 157

Links

Other RRM family RBPs
Other Tetraodon nigroviridis RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_10000359 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_10000359 N 0.000
fgenesh1_pg.C_scaffold_12000004 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_12000004 N 0.000
fgenesh1_pg.C_scaffold_12000135 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_12000135 N 0.000
fgenesh1_pg.C_scaffold_14000124 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_14000124 N 0.000
fgenesh1_pg.C_scaffold_19000085 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_19000085 N 0.000
fgenesh1_pg.C_scaffold_2000195 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000195 N 0.000
fgenesh1_pg.C_scaffold_2000541 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000541 N 0.000
fgenesh1_pg.C_scaffold_2000792 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000792 N 0.000
fgenesh1_pg.C_scaffold_24000066 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_24000066 N 0.000
fgenesh1_pg.C_scaffold_25000050 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_25000050 N 0.000
fgenesh1_pg.C_scaffold_3000375 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000375 N 0.000
fgenesh1_pg.C_scaffold_3000432 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000432 N 0.000
fgenesh1_pg.C_scaffold_3000511 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000511 N 0.000
fgenesh1_pg.C_scaffold_37000002 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_37000002 N 0.000
fgenesh1_pg.C_scaffold_4000057 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000057 N 0.000
fgenesh1_pg.C_scaffold_4000575 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000575 N 0.000
fgenesh1_pg.C_scaffold_5000015 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_5000015 N 0.000
fgenesh1_pg.C_scaffold_65000002 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_65000002 N 0.000
fgenesh1_pg.C_scaffold_70000003 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_70000003 N 0.000
fgenesh1_pg.C_scaffold_7000595 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_7000595 N 0.000
fgenesh1_pg.C_scaffold_79000001 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_79000001 N 0.000
fgenesh1_pg.C_scaffold_79000002 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_79000002 N 0.000