GI17947 (Drosophila mojavensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0140687 T43616_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
aret_CONSTRUCT
M229_0.6 		RNAcompete CONSTRUCTS UKUGUGU RNAcompete
Ray et al.(2013)
RNCMPT00270 		0.845
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0167164 RRM 10 80

Links

Other RRM family RBPs
Other Drosophila mojavensis RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GM26796 Drosophila sechellia FBgn0181649 I 0.972
GF19661 Drosophila ananassae FBgn0096668 I 0.972
GD23834 Drosophila simulans FBgn0195204 I 0.972
GG23781 Drosophila erecta FBgn0115920 I 0.958
ISCW008885 Ixodes scapularis ISCW008885 I 0.873
amel4_ncbi_hmm2201 Apis mellifera amel4_ncbi_hmm2201 I 0.873
Ppa-etr-1 Pristionchus pacificus PPA28330 I 0.817
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.817
e_gw.982.9.1 Nematostella vectensis e_gw.982.9.1 I 0.789
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.761
BGIBMGA005893 Bombyx mori BGIBMGA005893 I 0.761
CELF6 Anolis carolinensis ENSACAG00000006079 I 0.761
WUBG_04928 Wuchereria bancrofti WUBG_04928 I 0.761
NCBI_GNO_268900001 Daphnia pulex NCBI_GNO_268900001 I 0.761
ISCW010799 Ixodes scapularis ISCW010799 I 0.761
etr-1 Caenorhabditis elegans T01D1.2 D 0.761
gw1.77.52.1 Daphnia pulex gw1.77.52.1 I 0.761
SNAPOd2T00007754001 Oikopleura dioica SNAPOd2T00007754001 I 0.746
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.746
CELF3 Tetraodon nigroviridis ENSTNIG00000001919 I 0.746
CELF5 Macaca mulatta ENSMMUG00000015513 I 0.746
HEXA Macaca mulatta ENSMMUG00000010687 I 0.746
fgenesh2_pm.scaffold_186000008 Branchiostoma floridae fgenesh2_pm.scaffold_186000008 I 0.746
136083 Helobdella robusta 136083 I 0.746
BRUNOL6 Homo sapiens ENSG00000140488 D 0.746
AAEL003979 Aedes aegypti AAEL003979 I 0.732
ENSXETG00000021745 Xenopus tropicalis ENSXETG00000021745 I 0.732
CELF3 Homo sapiens ENSG00000159409 I 0.704