GD23834 (Drosophila simulans)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0195204 T44008_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
aret_CONSTRUCT
M229_0.6 		RNAcompete CONSTRUCTS UKUGUGU RNAcompete
Ray et al.(2013)
RNCMPT00270 		0.859
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0222236 RRM 80 150

Links

Other RRM family RBPs
Other Drosophila simulans RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GF19661 Drosophila ananassae FBgn0096668 I 1.000
GM26796 Drosophila sechellia FBgn0181649 I 1.000
GG23781 Drosophila erecta FBgn0115920 I 0.986
GI17947 Drosophila mojavensis FBgn0140687 I 0.972
ISCW008885 Ixodes scapularis ISCW008885 I 0.873
amel4_ncbi_hmm2201 Apis mellifera amel4_ncbi_hmm2201 I 0.873
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.831
Ppa-etr-1 Pristionchus pacificus PPA28330 I 0.817
e_gw.982.9.1 Nematostella vectensis e_gw.982.9.1 I 0.789
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.775
CELF6 Anolis carolinensis ENSACAG00000006079 I 0.775
gw1.77.52.1 Daphnia pulex gw1.77.52.1 I 0.775
ISCW010799 Ixodes scapularis ISCW010799 I 0.775
BGIBMGA005893 Bombyx mori BGIBMGA005893 I 0.775
NCBI_GNO_268900001 Daphnia pulex NCBI_GNO_268900001 I 0.775
CELF3 Tetraodon nigroviridis ENSTNIG00000001919 I 0.761
CELF5 Macaca mulatta ENSMMUG00000015513 I 0.761
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.761
WUBG_04928 Wuchereria bancrofti WUBG_04928 I 0.761
etr-1 Caenorhabditis elegans T01D1.2 D 0.761
136083 Helobdella robusta 136083 I 0.761
fgenesh2_pm.scaffold_186000008 Branchiostoma floridae fgenesh2_pm.scaffold_186000008 I 0.761
BRUNOL6 Homo sapiens ENSG00000140488 D 0.761
HEXA Macaca mulatta ENSMMUG00000010687 I 0.761
AAEL003979 Aedes aegypti AAEL003979 I 0.746
ENSXETG00000021745 Xenopus tropicalis ENSXETG00000021745 I 0.746
SNAPOd2T00007754001 Oikopleura dioica SNAPOd2T00007754001 I 0.746
CELF3 Homo sapiens ENSG00000159409 I 0.718