ISCW010799 (Ixodes scapularis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ISCW010799 T44851_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
aret_CONSTRUCT
M229_0.6 		RNAcompete CONSTRUCTS UKUGUGU RNAcompete
Ray et al.(2013)
RNCMPT00270 		0.775
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ISCW010799-PA RRM 201 271

Links

Other RRM family RBPs
Other Ixodes scapularis RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh2_pm.scaffold_186000008 Branchiostoma floridae fgenesh2_pm.scaffold_186000008 I 0.986
gw1.77.52.1 Daphnia pulex gw1.77.52.1 I 0.972
BGIBMGA005893 Bombyx mori BGIBMGA005893 I 0.972
NCBI_GNO_268900001 Daphnia pulex NCBI_GNO_268900001 I 0.972
AAEL003979 Aedes aegypti AAEL003979 I 0.958
CELF6 Anolis carolinensis ENSACAG00000006079 I 0.958
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.958
WUBG_04928 Wuchereria bancrofti WUBG_04928 I 0.944
CELF5 Macaca mulatta ENSMMUG00000015513 I 0.915
CELF3 Tetraodon nigroviridis ENSTNIG00000001919 I 0.915
BRUNOL6 Homo sapiens ENSG00000140488 D 0.887
HEXA Macaca mulatta ENSMMUG00000010687 I 0.887
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.887
ENSXETG00000021745 Xenopus tropicalis ENSXETG00000021745 I 0.887
CELF3 Homo sapiens ENSG00000159409 I 0.887
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.873
ISCW008885 Ixodes scapularis ISCW008885 I 0.817
amel4_ncbi_hmm2201 Apis mellifera amel4_ncbi_hmm2201 I 0.817
136083 Helobdella robusta 136083 I 0.817
SNAPOd2T00007754001 Oikopleura dioica SNAPOd2T00007754001 I 0.803
e_gw.982.9.1 Nematostella vectensis e_gw.982.9.1 I 0.803
GM26796 Drosophila sechellia FBgn0181649 I 0.775
GG23781 Drosophila erecta FBgn0115920 I 0.775
GF19661 Drosophila ananassae FBgn0096668 I 0.775
GD23834 Drosophila simulans FBgn0195204 I 0.775
GI17947 Drosophila mojavensis FBgn0140687 I 0.761
Ppa-etr-1 Pristionchus pacificus PPA28330 I 0.732
etr-1 Caenorhabditis elegans T01D1.2 D 0.704