XM_002887486.1 (Arabidopsis lyrata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh2_kg.2__1690__AT1G74230.1 T44504_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.2__1690__AT1G74230.1 RRM 36 105

Links

Other RRM family RBPs
Other Arabidopsis lyrata RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30138.m003973 Ricinus communis 30138.m003973 N 0.761
GR-RBP5 Arabidopsis thaliana AT1G74230-TAIR-G N 1.000
cassava29351.valid.m1 Manihot esculenta cassava29351.valid.m1 N 0.732
cassava29352.valid.m1 Manihot esculenta cassava29352.valid.m1 N 0.732
cassava43399.valid.m1 Manihot esculenta cassava43399.valid.m1 N 0.775
chr1.CM0410.300.nd Lotus japonicus chr1.CM0410.300.nd N 0.718
Cucsa.198260 Cucumis sativus Cucsa.198260 N 0.761
Glyma05g00400.1 Glycine max Glyma05g00400.1 N 0.789
Glyma08g26900.1 Glycine max Glyma08g26900.1 N 0.704
Glyma17g08630.1 Glycine max Glyma17g08630.1 N 0.789
Glyma18g50150.1 Glycine max Glyma18g50150.1 N 0.718
GSVIVG00007865001 Vitis vinifera GSVIVG00007865001 N 0.761
MDP0000255642 Malus x domestica MDP0000255642 N 0.718
MDP0000302917 Malus x domestica MDP0000302917 N 0.718
MDP0000635271 Malus x domestica MDP0000635271 N 0.732
mgf007732m Mimulus guttatus mgf007732m N 0.732
mgf012875m Mimulus guttatus mgf012875m N 0.761
mgf014059m Mimulus guttatus mgf014059m N 0.761
mgf016144m Mimulus guttatus mgf016144m N 0.761
PK15111.1 Cannabis sativa PK15111.1 N 0.789
B9I2R7_POPTR Populus trichocarpa POPTR_0012s05870 N 0.732
A9PIG6_POPTR Populus trichocarpa POPTR_0015s06810 N 0.718
ppa010113m Prunus persica ppa010113m N 0.761