MDP0000255642 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000255642 T57511_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000255642 RRM 275 345

Links

Other RRM family RBPs
Other Malus x domestica RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000302917 Malus x domestica MDP0000302917 N 1.000
MDP0000635271 Malus x domestica MDP0000635271 N 0.901
ppa010113m Prunus persica ppa010113m N 0.845
PK15111.1 Cannabis sativa PK15111.1 N 0.831
Glyma17g08630.1 Glycine max Glyma17g08630.1 N 0.817
cassava43399.valid.m1 Manihot esculenta cassava43399.valid.m1 N 0.817
Glyma05g00400.1 Glycine max Glyma05g00400.1 N 0.817
GSVIVG00007865001 Vitis vinifera GSVIVG00007865001 N 0.803
B9I2R7_POPTR Populus trichocarpa POPTR_0012s05870 N 0.789
cassava29352.valid.m1 Manihot esculenta cassava29352.valid.m1 N 0.775
cassava29351.valid.m1 Manihot esculenta cassava29351.valid.m1 N 0.775
Cucsa.198260 Cucumis sativus Cucsa.198260 N 0.761
LjT12A09.50.nd Lotus japonicus LjT12A09.50.nd N 0.761
30138.m003973 Ricinus communis 30138.m003973 N 0.761
mgf007732m Mimulus guttatus mgf007732m N 0.746
A9PIG6_POPTR Populus trichocarpa POPTR_0015s06810 N 0.746
PDK_20s1328241g004 Phoenix dactylifera PDK_20s1328241g004 N 0.732
mgf016144m Mimulus guttatus mgf016144m N 0.732
mgf012875m Mimulus guttatus mgf012875m N 0.732
mgf014059m Mimulus guttatus mgf014059m N 0.732
Medtr3g036670 Medicago truncatula Medtr3g036670 N 0.718
GR-RBP5 Arabidopsis thaliana AT1G74230-TAIR-G N 0.718
XM_002887486.1 Arabidopsis lyrata fgenesh2_kg.2__1690__AT1G74230.1 N 0.718
GR-RBP3 Arabidopsis thaliana AT5G61030-TAIR-G N 0.718
cassava7020.valid.m1 Manihot esculenta cassava7020.valid.m1 N 0.704
XM_002864670.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002097 N 0.704
GRMZM2G150521 Zea mays GRMZM2G150521 N 0.704
Cucsa.113230 Cucumis sativus Cucsa.113230 N 0.704