CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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fgenesh1_pm.00082_#_76
(
Aspergillus carbonarius
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
fgenesh1_pm.00082_#_76
T56567_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.00082_#_76
RRM
176
228
VYLGNIPAETSAEEILNHVRSGQIESVRLLPDKNCAFISFLDSNSATHFHSDA
fgenesh1_pm.00082_#_76
RRM
267
325
VYLGNLPEEMTEEELREELGKFGPIDTVKIVKEKAIGFVHFLSISNAMKAVSQLPQEAK
fgenesh1_pm.00082_#_76
RRM
401
466
IYLGNIHPETTIEEICNVVRGGLLHHIRYIPDKHICFVTFIDPTSAASFYALSNLQGLMIHNRRLK
fgenesh1_pm.00082_#_76
RRM
492
556
VYVGNLDETWSEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEGMRNRDEYKRFKI
Links
Other
RRM
family RBPs
Other
Aspergillus carbonarius
RBPs
49 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GK23596
Drosophila willistoni
FBgn0225558
N
0.000