fgenesh1_pm.00082_#_76 (Aspergillus carbonarius)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pm.00082_#_76 T56567_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.00082_#_76 RRM 176 228
fgenesh1_pm.00082_#_76 RRM 267 325
fgenesh1_pm.00082_#_76 RRM 401 466
fgenesh1_pm.00082_#_76 RRM 492 556

Links

Other RRM family RBPs
Other Aspergillus carbonarius RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_03865 Arthroderma benhamiae ARB_03865 N 0.889
BC1G_14118 Botrytis cinerea BC1G_14118 N 0.898
BDBG_09466 Blastomyces dermatitidis BDBG_09466 N 0.902
ACLA_068670 Aspergillus clavatus CADACLAG00006690 N 0.979
AFLA_129820 Aspergillus flavus CADAFLAG00010040 N 0.988
AFUA_2G05670 Aspergillus fumigatus CADAFUAG00003365 N 0.975
An02g14100 Aspergillus niger CADANGAG00002937 N 0.992
ANIA_07480 Aspergillus nidulans CADANIAG00000573 N 0.951
AO090001000681 Aspergillus oryzae CADAORAG00000620 N 0.984
ATEG_06757 Aspergillus terreus CADATEAG00009116 N 0.984
NFIA_082390 Neosartorya fischeri CADNFIAG00007689 N 0.979
CHGG_05709 Chaetomium globosum CHGG_05709 N 0.881
CIMG_00769 Coccidioides immitis CIMG_00769 N 0.906
CPSG_07981 Coccidioides posadasii CPSG_07981 N 0.898
EAT78895.1 Phaeosphaeria nodorum EAT78895.1 N 0.893
estExt_fgenesh1_pg.C_260060 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_260060 N 0.889
estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 Nectria haematococca estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 N 0.881
estExt_fgenesh1_pm.C_10719 Cryphonectria parasitica estExt_fgenesh1_pm.C_10719 N 0.873
estExt_fgenesh1_pm.C_60118 Neurospora tetrasperma estExt_fgenesh1_pm.C_60118 N 0.889
estExt_fgenesh3_kg.C_190032 Neurospora discreta estExt_fgenesh3_kg.C_190032 N 0.885
estExt_Genewise1.C_240173 Cochliobolus heterostrophus C5 estExt_Genewise1.C_240173 N 0.906
estExt_Genewise1.C_32212 Thielavia terrestris estExt_Genewise1.C_32212 N 0.889
estExt_Genewise1Plus.C_chr_30420 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_30420 N 0.869
e_gw1.10.53.1 Trichoderma virens e_gw1.10.53.1 N 0.868
e_gw1.15.72.1 Trichoderma atroviride e_gw1.15.72.1 N 0.868
e_gw1.17.287.1 Trichoderma reesei e_gw1.17.287.1 N 0.877
fgenesh1_pg.4_#_772 Myceliophthora thermophila fgenesh1_pg.4_#_772 N 0.893
FGSG_05444 Fusarium graminearum FGSG_05444 N 0.868
FOXG_09455 Fusarium oxysporum FOXG_09455 N 0.872
FVEG_07083 Fusarium verticillioides FVEG_07083 N 0.872
GLRG_03643 Colletotrichum graminicola GLRG_03643 N 0.877
GSTUMT00008077001 Tuber melanosporum GSTUMT00008077001 N 0.914
MCYG_03534 Microsporum canis MCYG_03534 N 0.893
MGG_08898 Magnaporthe oryzae MGG_08898 N 0.889
MGYG_03143 Microsporum gypseum MGYG_03143 N 0.889
NCU06459 Neurospora crassa NCU06459 N 0.889
PABG_04754 Paracoccidioides brasiliensis PABG_04754 N 0.906
Pa_7_9880 Podospora anserina Pa_7_9880 N 0.881
Pc22g08880 Penicillium chrysogenum Pc22g08880 N 0.926
PMAA_071470 Penicillium marneffei PMAA_071470 N 0.951
PTRG_09392 Pyrenophora tritici repentis PTRG_09392 N 0.910
SNOG_13871 Stagonospora nodorum SNOG_13871 N 0.893
SS1G_13716 Sclerotinia sclerotiorum SS1G_13716 N 0.902
TEQG_01254 Trichophyton equinum TEQG_01254 N 0.889
TERG_04964 Trichophyton rubrum TERG_04964 N 0.890
TESG_05970 Trichophyton tonsurans TESG_05970 N 0.889
UREG_00743 Uncinocarpus reesii UREG_00743 N 0.902
VDAG_06364 Verticillium dahliae VDAG_06364 N 0.881
VDBG_08703 Verticillium albo atrum VDBG_08703 N 0.852