Pa_1_1890 (Podospora anserina)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Pa_1_1890 T57902_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Pa_1_1890 RRM 57 127

Links

Other RRM family RBPs
Other Podospora anserina RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_11068 Botrytis cinerea BC1G_11068 N 0.761
CHGG_01938 Chaetomium globosum CHGG_01938 N 0.873
estExt_fgenesh1_kg.C_130003 Mycosphaerella fijiensis estExt_fgenesh1_kg.C_130003 N 0.718
estExt_fgenesh1_pg.C_20037 Myceliophthora thermophila estExt_fgenesh1_pg.C_20037 N 0.845
estExt_fgenesh2_kg.C_130331 Serpula lacrymans estExt_fgenesh2_kg.C_130331 I 0.718
estExt_fgenesh2_kg.C_40317 Thielavia terrestris estExt_fgenesh2_kg.C_40317 N 0.845
estExt_fgenesh2_kg.C_60460 Agaricus bisporus estExt_fgenesh2_kg.C_60460 I 0.704
estExt_Genewise1.C_40022 Postia placenta estExt_Genewise1.C_40022 N 0.704
estExt_Genewise1.C_70784 Neurospora discreta estExt_Genewise1.C_70784 N 0.831
estExt_Genewise1Plus.C_110234 Trichoderma atroviride estExt_Genewise1Plus.C_110234 N 0.817
estExt_Genewise1Plus.C_50393 Neurospora tetrasperma estExt_Genewise1Plus.C_50393 N 0.831
e_gw1.4.2145.1 Cryphonectria parasitica e_gw1.4.2145.1 N 0.831
e_gww2.3.582.1 Phanerochaete chrysosporium e_gww2.3.582.1 N 0.704
fgenesh1_kg.C_scaffold_4000104 Schizophyllum commune fgenesh1_kg.C_scaffold_4000104 I 0.718
fgenesh1_pg.sca_1_chr1_3_0001239 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0001239 N 0.775
fgenesh1_pm.C_scaffold_6000172 Pleurotus ostreatus fgenesh1_pm.C_scaffold_6000172 I 0.704
FGSG_04914 Fusarium graminearum FGSG_04914 N 0.761
FOXG_05707 Fusarium oxysporum FOXG_05707 N 0.803
FVEG_03573 Fusarium verticillioides FVEG_03573 N 0.803
GLRG_00505 Colletotrichum graminicola GLRG_00505 N 0.845
gw1.23.298.1 Trichoderma reesei gw1.23.298.1 N 0.831
gw1.3.1887.1 Trichoderma virens gw1.3.1887.1 N 0.845
gww1.22.130.1 Laccaria bicolor gww1.22.130.1 I 0.718
MGG_03740 Magnaporthe oryzae MGG_03740 N 0.817
NCU03226 Neurospora crassa NCU03226 N 0.831
PTRG_10763 Pyrenophora tritici repentis PTRG_10763 N 0.704
SS1G_12129 Sclerotinia sclerotiorum SS1G_12129 N 0.775