e_gww2.3.582.1 (Phanerochaete chrysosporium)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gww2.3.582.1 T50320_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gww2.3.582.1 RRM 11 81

Links

Other RRM family RBPs
Other Phanerochaete chrysosporium RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pm.C_scaffold_6000172 Pleurotus ostreatus fgenesh1_pm.C_scaffold_6000172 I 0.887
e_gw1.6.577.1 Heterobasidion annosum e_gw1.6.577.1 N 0.887
estExt_Genewise1.C_40022 Postia placenta estExt_Genewise1.C_40022 N 0.873
estExt_fgenesh2_kg.C_60460 Agaricus bisporus estExt_fgenesh2_kg.C_60460 I 0.873
CC1G_08323 Coprinopsis cinerea CC1G_08323 N 0.873
estExt_fgenesh2_kg.C_130331 Serpula lacrymans estExt_fgenesh2_kg.C_130331 I 0.859
gww1.22.130.1 Laccaria bicolor gww1.22.130.1 I 0.859
fgenesh1_kg.C_scaffold_4000104 Schizophyllum commune fgenesh1_kg.C_scaffold_4000104 I 0.831
SPPG_02323 Spizellomyces punctatus SPPG_02323 I 0.746
e_gw1.5.731.1 Sporobolomyces roseus e_gw1.5.731.1 N 0.732
NCU03226 Neurospora crassa NCU03226 N 0.732
estExt_fgenesh1_kg.C_130003 Mycosphaerella fijiensis estExt_fgenesh1_kg.C_130003 N 0.732
SS1G_12129 Sclerotinia sclerotiorum SS1G_12129 N 0.732
BC1G_11068 Botrytis cinerea BC1G_11068 N 0.732
estExt_Genewise1Plus.C_50393 Neurospora tetrasperma estExt_Genewise1Plus.C_50393 N 0.732
estExt_Genewise1.C_70784 Neurospora discreta estExt_Genewise1.C_70784 N 0.732
gw1.23.298.1 Trichoderma reesei gw1.23.298.1 N 0.732
gw1.3.1887.1 Trichoderma virens gw1.3.1887.1 N 0.732
estExt_Genewise1Plus.C_110234 Trichoderma atroviride estExt_Genewise1Plus.C_110234 N 0.732
gwEuk.6.623.1 Ostreococcus lucimarinus gwEuk.6.623.1 N 0.718
estExt_fgenesh1_kg.C_20142 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_20142 N 0.718
estExt_fgenesh1_kg.C_chr_10019 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_10019 N 0.718
estExt_fgenesh2_kg.C_40317 Thielavia terrestris estExt_fgenesh2_kg.C_40317 N 0.718
fgenesh1_pg.sca_1_chr1_3_0001239 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0001239 N 0.718
PK01699.1 Cannabis sativa PK01699.1 N 0.704
rbm8a Danio rerio ENSDARG00000016516 I 0.704
e_gw1.136.78.1 Physcomitrella patens e_gw1.136.78.1 N 0.704
e_gw1.4.2145.1 Cryphonectria parasitica e_gw1.4.2145.1 N 0.704
EAT91924.1 Phaeosphaeria nodorum EAT91924.1 N 0.704
estExt_fgenesh1_pg.C_20037 Myceliophthora thermophila estExt_fgenesh1_pg.C_20037 N 0.704
AB00849.1 Alternaria brassicicola AB00849.1 N 0.704
Pa_1_1890 Podospora anserina Pa_1_1890 N 0.704
PTRG_10763 Pyrenophora tritici repentis PTRG_10763 N 0.704
CHGG_01938 Chaetomium globosum CHGG_01938 N 0.704
SNOG_00429 Stagonospora nodorum SNOG_00429 N 0.704