SB01G037100 (Sorghum bicolor)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 Sb01g037100 T60760_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb01g037100.1 S1 87 161
Sb01g037100.1 S1 175 243
Sb01g037100.1 S1 252 324

Links

Other S1 family RBPs
Other Sorghum bicolor RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29889.m003354 Ricinus communis 29889.m003354 N 0.784
RPS1 Arabidopsis thaliana AT5G30510-TAIR-G N 0.760
BGIOSIBCE010878 Oryza indica BGIOSIBCE010878 N 0.954
BRADI1G64130 Brachypodium distachyon BRADI1G64130 N 0.940
cassava42994.valid.m1 Manihot esculenta cassava42994.valid.m1 N 0.793
Cucsa.252380 Cucumis sativus Cucsa.252380 N 0.774
XM_002874427.1 Arabidopsis lyrata fgenesh2_kg.6__2815__AT5G30510.1 N 0.760
Glyma09g03660.1 Glycine max Glyma09g03660.1 N 0.751
Glyma15g14550.1 Glycine max Glyma15g14550.1 N 0.756
Glyma17g04190.1 Glycine max Glyma17g04190.1 N 0.751
GSVIVG00034940001 Vitis vinifera GSVIVG00034940001 N 0.797
LOC_Os03g20100 Oryza sativa LOC_Os03g20100 N 0.954
MDP0000158987 Malus x domestica MDP0000158987 N 0.760
MDP0000926379 Malus x domestica MDP0000926379 N 0.770
Medtr2g037310 Medicago truncatula Medtr2g037310 N 0.725
mgf005405m Mimulus guttatus mgf005405m N 0.783
mgf010973m Mimulus guttatus mgf010973m N 0.783
PK19934.1 Cannabis sativa PK19934.1 N 0.783
A9PE95_POPTR Populus trichocarpa POPTR_0008s10050 N 0.770
B9HX66_POPTR Populus trichocarpa POPTR_0010s16010 N 0.779
ppa006438m Prunus persica ppa006438m N 0.779