Glyma17g04190.1 (Glycine max)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 Glyma17g04190.1 T61300_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma17g04190.1 S1 93 167
Glyma17g04190.1 S1 181 249
Glyma17g04190.1 S1 258 330

Links

Other S1 family RBPs
Other Glycine max RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Cucsa.252380 Cucumis sativus Cucsa.252380 N 0.866
GSVIVG00034940001 Vitis vinifera GSVIVG00034940001 N 0.848
cassava42994.valid.m1 Manihot esculenta cassava42994.valid.m1 N 0.848
29889.m003354 Ricinus communis 29889.m003354 N 0.835
mgf005405m Mimulus guttatus mgf005405m N 0.834
ppa006438m Prunus persica ppa006438m N 0.834
mgf010973m Mimulus guttatus mgf010973m N 0.834
B9HX66_POPTR Populus trichocarpa POPTR_0010s16010 N 0.829
MDP0000926379 Malus x domestica MDP0000926379 N 0.829
A9PE95_POPTR Populus trichocarpa POPTR_0008s10050 N 0.829
PK19934.1 Cannabis sativa PK19934.1 N 0.825
MDP0000158987 Malus x domestica MDP0000158987 N 0.806
XM_002874427.1 Arabidopsis lyrata fgenesh2_kg.6__2815__AT5G30510.1 N 0.793
RPS1 Arabidopsis thaliana AT5G30510-TAIR-G N 0.793
Glyma09g03660.1 Glycine max Glyma09g03660.1 N 0.788
Glyma15g14550.1 Glycine max Glyma15g14550.1 N 0.779
BGIOSIBCE010878 Oryza indica BGIOSIBCE010878 N 0.756
LOC_Os03g20100 Oryza sativa LOC_Os03g20100 N 0.756
SB01G037100 Sorghum bicolor Sb01g037100 N 0.751
Medtr2g037310 Medicago truncatula Medtr2g037310 N 0.748
BRADI1G64130 Brachypodium distachyon BRADI1G64130 N 0.724