RPS1 (Arabidopsis thaliana)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 AT5G30510-TAIR-G T60142_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT5G30510.1-P S1 95 169
AT5G30510.1-P S1 183 251
AT5G30510.1-P S1 260 332

Links

Other S1 family RBPs
Other Arabidopsis thaliana RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002874427.1 Arabidopsis lyrata fgenesh2_kg.6__2815__AT5G30510.1 N 1.000
cassava42994.valid.m1 Manihot esculenta cassava42994.valid.m1 N 0.880
29889.m003354 Ricinus communis 29889.m003354 N 0.876
GSVIVG00034940001 Vitis vinifera GSVIVG00034940001 N 0.876
A9PE95_POPTR Populus trichocarpa POPTR_0008s10050 N 0.871
ppa006438m Prunus persica ppa006438m N 0.862
mgf010973m Mimulus guttatus mgf010973m N 0.857
mgf005405m Mimulus guttatus mgf005405m N 0.857
MDP0000926379 Malus x domestica MDP0000926379 N 0.853
B9HX66_POPTR Populus trichocarpa POPTR_0010s16010 N 0.853
Cucsa.252380 Cucumis sativus Cucsa.252380 N 0.848
PK19934.1 Cannabis sativa PK19934.1 N 0.839
MDP0000158987 Malus x domestica MDP0000158987 N 0.834
Glyma17g04190.1 Glycine max Glyma17g04190.1 N 0.793
Glyma09g03660.1 Glycine max Glyma09g03660.1 N 0.783
Glyma15g14550.1 Glycine max Glyma15g14550.1 N 0.783
SB01G037100 Sorghum bicolor Sb01g037100 N 0.760
BGIOSIBCE010878 Oryza indica BGIOSIBCE010878 N 0.756
LOC_Os03g20100 Oryza sativa LOC_Os03g20100 N 0.756
BRADI1G64130 Brachypodium distachyon BRADI1G64130 N 0.747
Medtr2g037310 Medicago truncatula Medtr2g037310 N 0.739