Medtr2g037310 (Medicago truncatula)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 Medtr2g037310 T61383_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr2g037310.1 S1 86 160
Medtr2g037310.1 S1 174 242
Medtr2g037310.1 S1 251 324

Links

Other S1 family RBPs
Other Medicago truncatula RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
mgf010973m Mimulus guttatus mgf010973m N 0.803
mgf005405m Mimulus guttatus mgf005405m N 0.803
Cucsa.252380 Cucumis sativus Cucsa.252380 N 0.798
GSVIVG00034940001 Vitis vinifera GSVIVG00034940001 N 0.794
B9HX66_POPTR Populus trichocarpa POPTR_0010s16010 N 0.784
ppa006438m Prunus persica ppa006438m N 0.780
MDP0000926379 Malus x domestica MDP0000926379 N 0.780
cassava42994.valid.m1 Manihot esculenta cassava42994.valid.m1 N 0.780
Glyma15g14550.1 Glycine max Glyma15g14550.1 N 0.775
29889.m003354 Ricinus communis 29889.m003354 N 0.772
PK19934.1 Cannabis sativa PK19934.1 N 0.771
Glyma09g03660.1 Glycine max Glyma09g03660.1 N 0.771
A9PE95_POPTR Populus trichocarpa POPTR_0008s10050 N 0.757
MDP0000158987 Malus x domestica MDP0000158987 N 0.752
Glyma17g04190.1 Glycine max Glyma17g04190.1 N 0.748
RPS1 Arabidopsis thaliana AT5G30510-TAIR-G N 0.739
XM_002874427.1 Arabidopsis lyrata fgenesh2_kg.6__2815__AT5G30510.1 N 0.739
LOC_Os03g20100 Oryza sativa LOC_Os03g20100 N 0.729
BGIOSIBCE010878 Oryza indica BGIOSIBCE010878 N 0.729
SB01G037100 Sorghum bicolor Sb01g037100 N 0.725
BRADI1G64130 Brachypodium distachyon BRADI1G64130 N 0.706