mgf005405m (Mimulus guttatus)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 mgf005405m T61337_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf005405m S1 97 171
mgf005405m S1 185 253
mgf005405m S1 262 334

Links

Other S1 family RBPs
Other Mimulus guttatus RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
mgf010973m Mimulus guttatus mgf010973m N 1.000
MDP0000926379 Malus x domestica MDP0000926379 N 0.931
ppa006438m Prunus persica ppa006438m N 0.922
29889.m003354 Ricinus communis 29889.m003354 N 0.917
GSVIVG00034940001 Vitis vinifera GSVIVG00034940001 N 0.917
cassava42994.valid.m1 Manihot esculenta cassava42994.valid.m1 N 0.912
Cucsa.252380 Cucumis sativus Cucsa.252380 N 0.908
PK19934.1 Cannabis sativa PK19934.1 N 0.899
MDP0000158987 Malus x domestica MDP0000158987 N 0.894
A9PE95_POPTR Populus trichocarpa POPTR_0008s10050 N 0.894
B9HX66_POPTR Populus trichocarpa POPTR_0010s16010 N 0.885
XM_002874427.1 Arabidopsis lyrata fgenesh2_kg.6__2815__AT5G30510.1 N 0.857
RPS1 Arabidopsis thaliana AT5G30510-TAIR-G N 0.857
Glyma17g04190.1 Glycine max Glyma17g04190.1 N 0.834
Glyma09g03660.1 Glycine max Glyma09g03660.1 N 0.806
Medtr2g037310 Medicago truncatula Medtr2g037310 N 0.803
Glyma15g14550.1 Glycine max Glyma15g14550.1 N 0.793
BGIOSIBCE010878 Oryza indica BGIOSIBCE010878 N 0.788
LOC_Os03g20100 Oryza sativa LOC_Os03g20100 N 0.788
SB01G037100 Sorghum bicolor Sb01g037100 N 0.783
BRADI1G64130 Brachypodium distachyon BRADI1G64130 N 0.756