fgenesh2_pg.scaffold_13000206 (Monosiga brevicollis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 fgenesh2_pg.scaffold_13000206 T05304_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_13000206 CCCH ZF 67 93
fgenesh2_pg.scaffold_13000206 CCCH ZF 105 131

Links

Other CCCH ZF family RBPs
Other Monosiga brevicollis RBPs

125 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSPPYG00000012458 Pongo pygmaeus ENSPPYG00000012458 I 0.722
ZFP36L2 Tetraodon nigroviridis ENSTNIG00000017103 I 0.704
ENSTNIG00000019802 Tetraodon nigroviridis ENSTNIG00000019802 I 0.704
ZFP36 Takifugu rubripes ENSTRUG00000002023 I 0.722
ENSTRUG00000003178 Takifugu rubripes ENSTRUG00000003178 I 0.722
ZFP36L2 Takifugu rubripes ENSTRUG00000006923 I 0.704
ZFP36L1 Takifugu rubripes ENSTRUG00000012295 I 0.741
ZFP36L1 Tarsius syrichta ENSTSYG00000009284 I 0.759
ZFP36L1 Tursiops truncatus ENSTTRG00000003475 I 0.759
ZFP36L2 Tursiops truncatus ENSTTRG00000006356 I 0.722
zfp36l2 Xenopus tropicalis ENSXETG00000009274 I 0.741
ZFP36L1 Tetraodon nigroviridis ENSTNIG00000002277 I 0.741
ZFP36 Tetraodon nigroviridis ENSTNIG00000000183 I 0.704
ZFP36L1 Taeniopygia guttata ENSTGUG00000011494 I 0.741
ZFP36L2 Pan troglodytes ENSPTRG00000011870 I 0.722
XR_022888.1 Pan troglodytes ENSPTRG00000030712 I 0.759
ZFP36L1 Pteropus vampyrus ENSPVAG00000011686 I 0.759
Zfp36l2 Rattus norvegicus ENSRNOG00000005067 I 0.722
TISB_RAT Rattus norvegicus ENSRNOG00000030024 I 0.759
ZFP36L1 Sus scrofa ENSSSCG00000002302 I 0.759
ENSSSCG00000008460 Sus scrofa ENSSSCG00000008460 I 0.722
ZFP36L2 Sus scrofa ENSSSCG00000008461 I 0.722
ZFP36L1 Spermophilus tridecemlineatus ENSSTOG00000009758 I 0.759
ZFP36L2 Tupaia belangeri ENSTBEG00000012370 I 0.722
zfp36l1 Xenopus tropicalis ENSXETG00000016987 I 0.741
e_gw1.40.110.1 Trichoplax adhaerens e_gw1.40.110.1 I 0.722
XP_001175810.1 Strongylocentrotus purpuratus XP_001175810.1 I 0.741
XP_001178437.1 Strongylocentrotus purpuratus XP_001178437.1 I 0.741
XP_782811.1 Strongylocentrotus purpuratus XP_782811.1 I 0.741
AAD24208 Xenopus laevis AAD24208 I 0.741
AAD24209 Xenopus laevis AAD24209 I 0.741
AAH44086 Xenopus laevis AAH44086 I 0.741
AAH84197 Xenopus laevis AAH84197 I 0.741
AAH84221 Xenopus laevis AAH84221 I 0.741
AAI00163 Xenopus laevis AAI00163 I 0.741
BAC54909 Xenopus laevis BAC54909 I 0.741
XP_001175665.1 Strongylocentrotus purpuratus XP_001175665.1 I 0.741
fgeneshCV_pg.C_scaffold_14000116 Chlorella vulgaris fgeneshCV_pg.C_scaffold_14000116 I 0.704
Ame_R004924 Ailuropoda melanoleuca Ame_R004924 I 0.759
e_gw.346.37.1 Nematostella vectensis e_gw.346.37.1 I 0.741
estExt_fgenesh2_pg.C_680108 Branchiostoma floridae estExt_fgenesh2_pg.C_680108 I 0.741
Q805B4 Xenopus laevis Q805B4 I 0.741
gw1.3.668.1 Ostreococcus RCC809 gw1.3.668.1 I 0.722
gw1.534.24.1 Capitella teleta gw1.534.24.1 I 0.722
gwEuk.3.753.1 Ostreococcus lucimarinus gwEuk.3.753.1 I 0.704
EFA80829.1 Polysphondylium pallidum EFA80829.1 I 0.704
BGIBMGA008337 Bombyx mori BGIBMGA008337 I 0.741
0300010273 Ostreococcus tauri 0300010273 I 0.704
Ame_R000168 Ailuropoda melanoleuca Ame_R000168 I 0.722
Q7ZXW9 Xenopus laevis Q7ZXW9 I 0.741
LOC100405281 Callithrix jacchus ENSCJAG00000015116 I 0.759
ZFP36L2 Anolis carolinensis ENSACAG00000014740 I 0.741
ENSACAG00000005547 Anolis carolinensis ENSACAG00000005547 I 0.759
CPIJ018734 Culex quinquefasciatus CPIJ018734 I 0.741
nasonia_NCBI_hmm9264 Nasonia vitripennis nasonia_NCBI_hmm9264 I 0.741
amel4_ncbi_hmm10964 Apis mellifera amel4_ncbi_hmm10964 I 0.741
CpipJ_CPIJ018734 Culex pipiens CpipJ_CPIJ018734 I 0.741
AAEL002308 Aedes aegypti AAEL002308 I 0.741
ZFP36 Gasterosteus aculeatus ENSGACG00000008344 I 0.741
ZFP36L1 Dasypus novemcinctus ENSDNOG00000005159 I 0.759
zfp36l2 Danio rerio ENSDARG00000021806 I 0.704
Q1JP65_BOVIN Bos taurus ENSBTAG00000003553 I 0.722
zfp36l1b Danio rerio ENSDARG00000021443 I 0.722
ZFP36L2 Cavia porcellus ENSCPOG00000022038 I 0.722
LOC100386590 Callithrix jacchus ENSCJAG00000014571 I 0.722
ZFP36L1 Cavia porcellus ENSCPOG00000025078 I 0.759
Q4H2G7_CIOIN Ciona intestinalis ENSCING00000014446 I 0.722
ZFP36L1 Canis familiaris ENSCAFG00000016497 I 0.759
ZFP36L2 Canis familiaris ENSCAFG00000002438 I 0.722
A7MB98_BOVIN Bos taurus ENSBTAG00000025434 I 0.759
ENSCSAVG00000002923 Ciona savignyi ENSCSAVG00000002923 I 0.722
zfp36l1a Danio rerio ENSDARG00000016154 I 0.759
Zfp36l1 Dipodomys ordii ENSDORG00000008348 I 0.759
LOC100063597 Equus caballus ENSECAG00000018860 I 0.759
ZFP36L2 Macropus eugenii ENSMEUG00000010649 I 0.722
ZFP36L2 Microcebus murinus ENSMICG00000010318 I 0.722
ZFP36L2 Myotis lucifugus ENSMLUG00000015588 I 0.722
ZFP36L2 Monodelphis domestica ENSMODG00000000407 I 0.722
Zfp36l1 Mus musculus ENSMUSG00000021127 I 0.759
Zfp36l2 Mus musculus ENSMUSG00000045817 I 0.722
ZFP36L2 Ornithorhynchus anatinus ENSOANG00000002848 I 0.759
ZFP36L1 Oryctolagus cuniculus ENSOCUG00000003168 I 0.759
ENSORLG00000008378 Oryzias latipes ENSORLG00000008378 I 0.722
ZFP36L1 Oryzias latipes ENSORLG00000011106 I 0.741
ZFP36L1 Procavia capensis ENSPCAG00000005383 I 0.759
ZFP36L2 Procavia capensis ENSPCAG00000010765 I 0.704
ZFP36L1 Macropus eugenii ENSMEUG00000003070 I 0.759
ZFP36L1 Loxodonta africana ENSLAFG00000028594 I 0.759
ZFP36L2 Homo sapiens ENSG00000152518 I 0.722
ZFP36L1 Homo sapiens ENSG00000185650 I 0.759
ENSGACG00000008351 Gasterosteus aculeatus ENSGACG00000008351 I 0.704
ZFP36L1 Gasterosteus aculeatus ENSGACG00000011271 I 0.741
ZFP36L2 Gorilla gorilla ENSGGOG00000001402 I 0.722
ENSPPYG00000005933 Pongo pygmaeus ENSPPYG00000005933 I 0.759
ZFP36L2 Loxodonta africana ENSLAFG00000004265 I 0.722
XP_002159721.1 Hydra magnipapillata XP_002159721.1 N 0.704
estExt_fgenesh3_pg.C_770054 Postia placenta estExt_fgenesh3_pg.C_770054 N 0.704
CC1G_04402 Coprinopsis cinerea CC1G_04402 N 0.704
AGAP010954 Anopheles gambiae AGAP010954 N 0.741
PTSG_01604 Salpingoeca rosetta PTSG_01604 N 0.778
estExt_genemark.C_30534 Pleurotus ostreatus estExt_genemark.C_30534 N 0.704
estExt_fgenesh2_kg.C_10578 Serpula lacrymans estExt_fgenesh2_kg.C_10578 N 0.704
AMAG_15989 Allomyces macrogynus AMAG_15989 N 0.722
gw1.42.93.1 Daphnia pulex gw1.42.93.1 N 0.759
GJ15863 Drosophila virilis FBgn0203050 N 0.704
GM11580 Drosophila sechellia FBgn0166523 N 0.704
GL13141 Drosophila persimilis FBgn0150747 N 0.704
GI21684 Drosophila mojavensis FBgn0144414 N 0.704
GH17894 Drosophila grimshawi FBgn0125362 N 0.704
GG17735 Drosophila erecta FBgn0109957 N 0.704
GF21384 Drosophila ananassae FBgn0098386 N 0.704
GA17935-RA Drosophila pseudoobscura FBgn0077944 N 0.704
Tis11 Drosophila melanogaster FBgn0011837 N 0.704
GK25600 Drosophila willistoni FBgn0227559 N 0.704
GE17025 Drosophila yakuba FBgn0234511 N 0.704
gw1.30.59.1 Lottia gigantea gw1.30.59.1 N 0.722
gw1.1.1133.1 Micromonas pusilla gw1.1.1133.1 N 0.722
fgenesh2_pg.C_scaffold_32000041 Selaginella moellendorfii fgenesh2_pg.C_scaffold_32000041 N 0.722
fgenesh1_pg.C_scaffold_11000103 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000103 N 0.704
estExt_fgenesh2_pg.C_10793 Laccaria bicolor estExt_fgenesh2_pg.C_10793 N 0.704
estExt_fgenesh1_pm.C_10824 Schizophyllum commune estExt_fgenesh1_pm.C_10824 N 0.704
e_gw1.45.79.1 Selaginella moellendorfii e_gw1.45.79.1 N 0.722
au.g10607_t1 Chlamydomonas reinhardtii au.g10607_t1 N 0.704
SNAPOd2T00019452001 Oikopleura dioica SNAPOd2T00019452001 N 0.741
AMAG_06814 Allomyces macrogynus AMAG_06814 N 0.722