CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AFUA_3G10840
(
Aspergillus fumigatus
)
CCHC ZF,KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1)
IPR001878
IPR018111
CADAFUAG00005564
T06975_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAFUAP00005564
KH
183
266
EKVYVPVNDYPEINFIGLLIGPRGNTLKKMEAESGAKIAIRGKGSVKEGKGRSDAAHASNQEEDLHCLIMADTEEKVNKAKKLV
CADAFUAP00005564
CCHC ZF
304
321
QACQNCGQIGHRKYDCPE
CADAFUAP00005564
CCHC ZF
329
346
IICRVCGNAGHMARDCPD
Links
Other
CCHC ZF,KH
family RBPs
Other
Aspergillus fumigatus
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PMAA_023720
Penicillium marneffei
PMAA_023720
N
0.967
estExt_fgenesh1_pm.C_10341
Neurospora tetrasperma
estExt_fgenesh1_pm.C_10341
N
0.975
e_gw1.6.74.1
Phycomyces blakesleeanus
e_gw1.6.74.1
N
0.708
bpb1
Schizosaccharomyces pombe
SPCC962.06c
N
0.750
NCU04110
Neurospora crassa
NCU04110
N
0.975
NFIA_066410
Neosartorya fischeri
CADNFIAG00006460
N
0.992
ANIA_10615
Aspergillus nidulans
CADANIAG00005496
N
0.992
An02g06570
Aspergillus niger
CADANGAG00002175
N
0.992
AFLA_031810
Aspergillus flavus
CADAFLAG00002556
N
0.992
ACLA_038770
Aspergillus clavatus
CADACLAG00003525
N
0.992
estExt_fgenesh1_pm.C_50279
Schizophyllum commune
estExt_fgenesh1_pm.C_50279
N
0.700
estExt_Genewise1.C_12313
Neurospora discreta
estExt_Genewise1.C_12313
N
0.742
Pc18g00800
Penicillium chrysogenum
Pc18g00800
N
0.983
Pa_2_3850
Podospora anserina
Pa_2_3850
N
0.975
GSTUMT00005703001
Tuber melanosporum
GSTUMT00005703001
N
0.967
estExt_Genewise1.C_12889
Cryphonectria parasitica
estExt_Genewise1.C_12889
N
0.983
AB04099.1
Alternaria brassicicola
AB04099.1
N
0.942
PredSwiss_EST660.1
Pneumocystis carinii
PredSwiss_EST660.1
N
0.792
EAT80773.2
Phaeosphaeria nodorum
EAT80773.2
N
0.950
estExt_Genewise1Plus.C_chr_50382
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_50382
N
0.917
estExt_Genewise1Plus.C_22270
Thielavia terrestris
estExt_Genewise1Plus.C_22270
N
0.975
VDBG_09415
Verticillium albo atrum
VDBG_09415
N
0.975
VDAG_04652
Verticillium dahliae
VDAG_04652
N
0.975
MGG_06748
Magnaporthe oryzae
MGG_06748
N
0.958
MCYG_00821
Microsporum canis
MCYG_00821
N
0.950
GLRG_01222
Colletotrichum graminicola
GLRG_01222
N
0.975
FVEG_07538
Fusarium verticillioides
FVEG_07538
N
0.842
FGSG_02080
Fusarium graminearum
FGSG_02080
N
0.950
CPSG_03514
Coccidioides posadasii
CPSG_03514
N
0.975
CIMG_03768
Coccidioides immitis
CIMG_03768
N
0.975
CHGG_07335
Chaetomium globosum
CHGG_07335
N
0.967
BDBG_03134
Blastomyces dermatitidis
BDBG_03134
N
0.967
MGYG_01149
Microsporum gypseum
MGYG_01149
N
0.942
PABG_02328
Paracoccidioides brasiliensis
PABG_02328
N
0.833
TESG_02440
Trichophyton tonsurans
TESG_02440
N
0.808
TERG_00369
Trichophyton rubrum
TERG_00369
N
0.942
TEQG_01541
Trichophyton equinum
TEQG_01541
N
0.808
SS1G_07196
Sclerotinia sclerotiorum
SS1G_07196
N
0.942
SPOG_03392
Schizosaccharomyces cryophilus
SPOG_03392
N
0.742
SOCG_03845
Schizosaccharomyces octosporus
SOCG_03845
N
0.742
SNOG_11729
Stagonospora nodorum
SNOG_11729
N
0.867
SJAG_00249
Schizosaccharomyces japonicus
SJAG_00249
N
0.808
PTRG_00022
Pyrenophora tritici repentis
PTRG_00022
N
0.933
BC1G_07392
Botrytis cinerea
BC1G_07392
N
0.942