LOC100410115 (Callithrix jacchus)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		ENSCJAG00000017749 T07215_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZCRB1
M085_0.6 		Homo sapiens GRHUUAA RNAcompete
Ray et al.(2013)
RNCMPT00087 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000032747 RRM 12 82
ENSCJAP00000032747 CCHC ZF 105 122

Links

Other CCHC ZF,RRM family RBPs
Other Callithrix jacchus RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRE5 Saccharomyces cerevisiae YNR051C N 0.000
18975_YNR051C Saccharomyces mikatae 18975_YNR051C N 0.000
21881_YNR051C Saccharomyces bayanus 21881_YNR051C N 0.000