XM_001371517.1 (Monodelphis domestica)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		ENSMODG00000006493 T07281_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZCRB1
M085_0.6 		Homo sapiens GRHUUAA RNAcompete
Ray et al.(2013)
RNCMPT00087 		0.944
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000008059 RRM 12 82
ENSMODP00000008059 CCHC ZF 105 122
ENSMODP00000025181 RRM 12 82
ENSMODP00000025181 CCHC ZF 105 122

Links

Other CCHC ZF,RRM family RBPs
Other Monodelphis domestica RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os03g26560 Oryza sativa LOC_Os03g26560 N 0.000
LOC_Os12g18180 Oryza sativa LOC_Os12g18180 N 0.000
LOC_Os12g14010 Oryza sativa LOC_Os12g14010 N 0.000
LOC_Os05g39030 Oryza sativa LOC_Os05g39030 N 0.000
LOC_Os05g17240 Oryza sativa LOC_Os05g17240 N 0.000
LOC_Os05g17220 Oryza sativa LOC_Os05g17220 N 0.000
LOC_Os04g29500 Oryza sativa LOC_Os04g29500 N 0.000
LOC_Os04g19410 Oryza sativa LOC_Os04g19410 N 0.000
LOC_Os03g33050 Oryza sativa LOC_Os03g33050 N 0.000
LOC_Os12g25590 Oryza sativa LOC_Os12g25590 N 0.000