CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BC1G_09586
(
Botrytis cinerea
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
BC1G_09586
T07849_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BC1T_09586
CCHC ZF
250
267
PTCFKCRKTGHYANNCPT
Links
Other
CCHC ZF
family RBPs
Other
Botrytis cinerea
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PMAA_039640
Penicillium marneffei
PMAA_039640
N
0.000
estExt_fgenesh2_pm.C_60019
Thielavia terrestris
estExt_fgenesh2_pm.C_60019
N
0.000
estExt_fgenesh1_pg.C_80160
Trichoderma virens
estExt_fgenesh1_pg.C_80160
N
0.000
e_gw1.5.456.1
Mycosphaerella fijiensis
e_gw1.5.456.1
N
0.000
NCU05343
Neurospora crassa
NCU05343
N
0.000
NFIA_040180
Neosartorya fischeri
CADNFIAG00003684
N
0.000
ATEG_09814
Aspergillus terreus
CADATEAG00005663
N
0.000
AO090003001325
Aspergillus oryzae
CADAORAG00001849
N
0.000
ANIA_08038
Aspergillus nidulans
CADANIAG00004059
N
0.000
estExt_Genewise1.C_110656
Neurospora discreta
estExt_Genewise1.C_110656
N
0.000
estExt_Genewise1Plus.C_570036
Neurospora tetrasperma
estExt_Genewise1Plus.C_570036
N
0.000
fgenesh1_pm.C_scaffold_19000008
Trichoderma atroviride
fgenesh1_pm.C_scaffold_19000008
N
0.000
Pc21g14530
Penicillium chrysogenum
Pc21g14530
N
0.000
Pa_6_11740
Podospora anserina
Pa_6_11740
N
0.000
GSTUMT00005304001
Tuber melanosporum
GSTUMT00005304001
N
0.000
fgenesh1_pm.00168_#_115
Aspergillus carbonarius
fgenesh1_pm.00168_#_115
N
0.000
fgenesh1_pg.C_scaffold_2001068
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_2001068
N
0.000
CAGL0A04213g
Candida glabrata
CAGL0A04213g
N
0.000
fgenesh1_pm.sca_8_chr1_1_0000077
Nectria haematococca
fgenesh1_pm.sca_8_chr1_1_0000077
N
0.000
fgenesh1_pm.C_scaffold_32000008
Trichoderma reesei
fgenesh1_pm.C_scaffold_32000008
N
0.000
An16g01800
Aspergillus niger
CADANGAG00012651
N
0.000
AFUA_5G01940
Aspergillus fumigatus
CADAFUAG00002843
N
0.000
AFLA_025070
Aspergillus flavus
CADAFLAG00001883
N
0.000
MCYG_02010
Microsporum canis
MCYG_02010
N
0.000
HCAG_04905
Histoplasma capsulatum
HCAG_04905
N
0.000
GLRG_06288
Colletotrichum graminicola
GLRG_06288
N
0.000
FVEG_09726
Fusarium verticillioides
FVEG_09726
N
0.000
FOXG_11073
Fusarium oxysporum
FOXG_11073
N
0.000
FGSG_01629
Fusarium graminearum
FGSG_01629
N
0.000
CHGG_08312
Chaetomium globosum
CHGG_08312
N
0.000
BDBG_02675
Blastomyces dermatitidis
BDBG_02675
N
0.000
MGG_06218
Magnaporthe oryzae
MGG_06218
N
0.000
MGYG_04073
Microsporum gypseum
MGYG_04073
N
0.000
PABG_00017
Paracoccidioides brasiliensis
PABG_00017
N
0.000
ACLA_003320
Aspergillus clavatus
CADACLAG00000413
N
0.000
VDBG_05689
Verticillium albo atrum
VDBG_05689
N
0.000
VDAG_07628
Verticillium dahliae
VDAG_07628
N
0.000
TRV_07498
Trichophyton verrucosum
TRV_07498
N
0.000
TESG_06836
Trichophyton tonsurans
TESG_06836
N
0.000
TERG_04408
Trichophyton rubrum
TERG_04408
N
0.000
TEQG_06159
Trichophyton equinum
TEQG_06159
N
0.000
SS1G_02057
Sclerotinia sclerotiorum
SS1G_02057
N
0.000
ARB_00840
Arthroderma benhamiae
ARB_00840
N
0.000