SS1G_02057 (Sclerotinia sclerotiorum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SS1G_02057 T30957_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SS1T_02057 RRM 169 239

Links

Other RRM family RBPs
Other Sclerotinia sclerotiorum RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HCAG_04905 Histoplasma capsulatum HCAG_04905 N 0.817
UREG_04006 Uncinocarpus reesii UREG_04006 N 0.817
PMAA_039640 Penicillium marneffei PMAA_039640 N 0.817
PABG_00017 Paracoccidioides brasiliensis PABG_00017 N 0.803
GSTUMT00005304001 Tuber melanosporum GSTUMT00005304001 N 0.803
TEQG_06159 Trichophyton equinum TEQG_06159 N 0.803
e_gw1.5.456.1 Mycosphaerella fijiensis e_gw1.5.456.1 N 0.803
MGYG_04073 Microsporum gypseum MGYG_04073 N 0.803
MCYG_02010 Microsporum canis MCYG_02010 N 0.803
TERG_04408 Trichophyton rubrum TERG_04408 N 0.803
CPSG_00675 Coccidioides posadasii CPSG_00675 N 0.803
ACLA_003320 Aspergillus clavatus CADACLAG00000413 N 0.803
TESG_06836 Trichophyton tonsurans TESG_06836 N 0.803
BDBG_02675 Blastomyces dermatitidis BDBG_02675 N 0.803
ARB_00840 Arthroderma benhamiae ARB_00840 N 0.803
CIMG_06397 Coccidioides immitis CIMG_06397 N 0.803
TRV_07498 Trichophyton verrucosum TRV_07498 N 0.803
Pc21g14530 Penicillium chrysogenum Pc21g14530 N 0.789
fgenesh1_pm.00168_#_115 Aspergillus carbonarius fgenesh1_pm.00168_#_115 N 0.789
EAT83231.2 Phaeosphaeria nodorum EAT83231.2 N 0.789
AO090003001325 Aspergillus oryzae CADAORAG00001849 N 0.789
ATEG_09814 Aspergillus terreus CADATEAG00005663 N 0.789
ANIA_08038 Aspergillus nidulans CADANIAG00004059 N 0.789
An16g01800 Aspergillus niger CADANGAG00012651 N 0.789
AFLA_025070 Aspergillus flavus CADAFLAG00001883 N 0.789
AFUA_5G01940 Aspergillus fumigatus CADAFUAG00002843 N 0.789
NFIA_040180 Neosartorya fischeri CADNFIAG00003684 N 0.789
SNOG_09039 Stagonospora nodorum SNOG_09039 N 0.789
estExt_fgenesh1_pg.C_chr_80368 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80368 N 0.775
PTRG_00597 Pyrenophora tritici repentis PTRG_00597 N 0.761
AB09303.1 Alternaria brassicicola AB09303.1 N 0.761
estExt_fgenesh1_pm.C_190004 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_190004 N 0.761
A7TMV9_VANPO Vanderwaltozyma polyspora A7TMV9_VANPO N 0.746
YALI0D15752g Yarrowia lipolytica YALI0D15752g N 0.732
fgenesh1_pm.C_scaffold_32000008 Trichoderma reesei fgenesh1_pm.C_scaffold_32000008 N 0.732
fgenesh1_pm.sca_8_chr1_1_0000077 Nectria haematococca fgenesh1_pm.sca_8_chr1_1_0000077 N 0.718
FOXG_11073 Fusarium oxysporum FOXG_11073 N 0.718
SAKL0F11924g Lachancea kluyveri SAKL0F11924g N 0.718
fgenesh1_pm.C_scaffold_19000008 Trichoderma atroviride fgenesh1_pm.C_scaffold_19000008 N 0.718
FGSG_01629 Fusarium graminearum FGSG_01629 N 0.718
FVEG_09726 Fusarium verticillioides FVEG_09726 N 0.718
KLLA0E19845g Kluyveromyces lactis KLLA0E19845g N 0.718
ACR235W Ashbya gossypii ACR235W N 0.718
A7TQD0_VANPO Vanderwaltozyma polyspora A7TQD0_VANPO N 0.718
fgenesh1_pg.C_scaffold_2001068 Cryphonectria parasitica fgenesh1_pg.C_scaffold_2001068 N 0.718
Scas_Contig500.6 Saccharomyces castellii Scas_Contig500.6 N 0.718
KLTH0B04950g Kluyveromyces thermotolerans KLTH0B04950g N 0.718
estExt_fgenesh1_pg.C_80160 Trichoderma virens estExt_fgenesh1_pg.C_80160 N 0.718
LELG_00183 Lodderomyces elongisporus LELG_00183 N 0.718
DEHA0A07766g Debaryomyces hansenii DEHA0A07766g N 0.704
PIN4 Candida albicans orf19.2534 N 0.704
PGUG_01669 Candida guilliermondii PGUG_01669 N 0.704
CTRG_00938 Candida tropicalis CTRG_00938 N 0.704
GLRG_06288 Colletotrichum graminicola GLRG_06288 N 0.704
Cd36_26480 Candida dubliniensis Cd36_26480 N 0.704
Skud_Contig1725.4 Saccharomyces kudriavzevii Skud_Contig1725.4 N 0.704
1078_YHR132C Saccharomyces bayanus 1078_YHR132C N 0.704
fgenesh1_pm.7_#_729 Myceliophthora thermophila fgenesh1_pm.7_#_729 N 0.704
estExt_fgenesh2_pm.C_60019 Thielavia terrestris estExt_fgenesh2_pm.C_60019 N 0.704
PIN4 Saccharomyces cerevisiae YBL051C N 0.704
estExt_fgenesh1_pg.C_chr_8.10303 Pichia stipitis estExt_fgenesh1_pg.C_chr_8.10303 N 0.704
1510_YBL051C Saccharomyces mikatae 1510_YBL051C N 0.704
539_YBL051C Saccharomyces paradoxus 539_YBL051C N 0.704
CHGG_08312 Chaetomium globosum CHGG_08312 N 0.704
CLUG_00283 Candida lusitaniae CLUG_00283 N 0.704
ZYRO0B02860g Zygosaccharomyces rouxii ZYRO0B02860g N 0.704
Pa_6_11740 Podospora anserina Pa_6_11740 N 0.704
Kwal_14810 Kluyveromyces waltii Kwal_14810 N 0.704
CPAG_02687 Candida parapsilosis CPAG_02687 N 0.704