TRV_07498 (Trichophyton verrucosum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 TRV_07498 T31247_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
TRV_07498 RRM 156 226

Links

Other RRM family RBPs
Other Trichophyton verrucosum RBPs

75 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MGYG_04073 Microsporum gypseum MGYG_04073 N 1.000
ARB_00840 Arthroderma benhamiae ARB_00840 N 1.000
TEQG_06159 Trichophyton equinum TEQG_06159 N 1.000
MCYG_02010 Microsporum canis MCYG_02010 N 1.000
TESG_06836 Trichophyton tonsurans TESG_06836 N 1.000
TERG_04408 Trichophyton rubrum TERG_04408 N 1.000
PABG_00017 Paracoccidioides brasiliensis PABG_00017 N 0.972
BDBG_02675 Blastomyces dermatitidis BDBG_02675 N 0.972
PMAA_039640 Penicillium marneffei PMAA_039640 N 0.958
CPSG_00675 Coccidioides posadasii CPSG_00675 N 0.958
Pc21g14530 Penicillium chrysogenum Pc21g14530 N 0.958
HCAG_04905 Histoplasma capsulatum HCAG_04905 N 0.958
CIMG_06397 Coccidioides immitis CIMG_06397 N 0.958
fgenesh1_pm.00168_#_115 Aspergillus carbonarius fgenesh1_pm.00168_#_115 N 0.958
ANIA_08038 Aspergillus nidulans CADANIAG00004059 N 0.958
AFLA_025070 Aspergillus flavus CADAFLAG00001883 N 0.958
ATEG_09814 Aspergillus terreus CADATEAG00005663 N 0.958
AFUA_5G01940 Aspergillus fumigatus CADAFUAG00002843 N 0.958
An16g01800 Aspergillus niger CADANGAG00012651 N 0.958
NFIA_040180 Neosartorya fischeri CADNFIAG00003684 N 0.958
AO090003001325 Aspergillus oryzae CADAORAG00001849 N 0.958
ACLA_003320 Aspergillus clavatus CADACLAG00000413 N 0.930
UREG_04006 Uncinocarpus reesii UREG_04006 N 0.930
GSTUMT00005304001 Tuber melanosporum GSTUMT00005304001 N 0.873
estExt_fgenesh1_pm.C_190004 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_190004 N 0.873
PTRG_00597 Pyrenophora tritici repentis PTRG_00597 N 0.873
AB09303.1 Alternaria brassicicola AB09303.1 N 0.873
e_gw1.5.456.1 Mycosphaerella fijiensis e_gw1.5.456.1 N 0.859
EAT83231.2 Phaeosphaeria nodorum EAT83231.2 N 0.845
SNOG_09039 Stagonospora nodorum SNOG_09039 N 0.845
estExt_fgenesh1_pg.C_chr_80368 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80368 N 0.817
SS1G_02057 Sclerotinia sclerotiorum SS1G_02057 N 0.803
CLUG_00283 Candida lusitaniae CLUG_00283 N 0.775
estExt_fgenesh1_pg.C_chr_8.10303 Pichia stipitis estExt_fgenesh1_pg.C_chr_8.10303 N 0.775
YALI0D15752g Yarrowia lipolytica YALI0D15752g N 0.775
CTRG_00938 Candida tropicalis CTRG_00938 N 0.761
CPAG_02687 Candida parapsilosis CPAG_02687 N 0.761
LELG_00183 Lodderomyces elongisporus LELG_00183 N 0.761
Cd36_26480 Candida dubliniensis Cd36_26480 N 0.761
PIN4 Candida albicans orf19.2534 N 0.761
DEHA0A07766g Debaryomyces hansenii DEHA0A07766g N 0.761
PGUG_01669 Candida guilliermondii PGUG_01669 N 0.746
XP_002491986.1 Pichia pastoris XP_002491986.1 N 0.746
KLLA0E19845g Kluyveromyces lactis KLLA0E19845g N 0.746
Scas_Contig500.6 Saccharomyces castellii Scas_Contig500.6 N 0.746
FVEG_09726 Fusarium verticillioides FVEG_09726 N 0.732
NCU05343 Neurospora crassa NCU05343 N 0.732
FOXG_11073 Fusarium oxysporum FOXG_11073 N 0.732
FGSG_01629 Fusarium graminearum FGSG_01629 N 0.732
PIN4 Saccharomyces cerevisiae YBL051C N 0.732
A7TMV9_VANPO Vanderwaltozyma polyspora A7TMV9_VANPO N 0.732
fgenesh1_pg.C_scaffold_2001068 Cryphonectria parasitica fgenesh1_pg.C_scaffold_2001068 N 0.732
estExt_Genewise1Plus.C_570036 Neurospora tetrasperma estExt_Genewise1Plus.C_570036 N 0.732
estExt_Genewise1.C_110656 Neurospora discreta estExt_Genewise1.C_110656 N 0.732
fgenesh1_pm.sca_8_chr1_1_0000077 Nectria haematococca fgenesh1_pm.sca_8_chr1_1_0000077 N 0.732
SAKL0F11924g Lachancea kluyveri SAKL0F11924g N 0.732
1078_YHR132C Saccharomyces bayanus 1078_YHR132C N 0.718
Skud_Contig1725.4 Saccharomyces kudriavzevii Skud_Contig1725.4 N 0.718
fgenesh1_pm.7_#_729 Myceliophthora thermophila fgenesh1_pm.7_#_729 N 0.718
estExt_fgenesh2_pm.C_60019 Thielavia terrestris estExt_fgenesh2_pm.C_60019 N 0.718
1510_YBL051C Saccharomyces mikatae 1510_YBL051C N 0.718
fgenesh1_pm.C_scaffold_19000008 Trichoderma atroviride fgenesh1_pm.C_scaffold_19000008 N 0.718
539_YBL051C Saccharomyces paradoxus 539_YBL051C N 0.718
ZYRO0B02860g Zygosaccharomyces rouxii ZYRO0B02860g N 0.718
estExt_fgenesh1_pg.C_80160 Trichoderma virens estExt_fgenesh1_pg.C_80160 N 0.718
ACR235W Ashbya gossypii ACR235W N 0.718
Kwal_14810 Kluyveromyces waltii Kwal_14810 N 0.718
GLRG_06288 Colletotrichum graminicola GLRG_06288 N 0.718
CHGG_08312 Chaetomium globosum CHGG_08312 N 0.704
VDAG_07628 Verticillium dahliae VDAG_07628 N 0.704
VDBG_05689 Verticillium albo atrum VDBG_05689 N 0.704
KLTH0B04950g Kluyveromyces thermotolerans KLTH0B04950g N 0.704
CAGL0A04213g Candida glabrata CAGL0A04213g N 0.704
fgenesh1_pm.C_scaffold_32000008 Trichoderma reesei fgenesh1_pm.C_scaffold_32000008 N 0.704
Pa_6_11740 Podospora anserina Pa_6_11740 N 0.704