fgenesh1_pg.C_scaffold_2001068 (Cryphonectria parasitica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pg.C_scaffold_2001068 T56559_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_2001068 RRM 226 296

Links

Other RRM family RBPs
Other Cryphonectria parasitica RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FVEG_09726 Fusarium verticillioides FVEG_09726 N 0.817
FOXG_11073 Fusarium oxysporum FOXG_11073 N 0.817
FGSG_01629 Fusarium graminearum FGSG_01629 N 0.817
fgenesh1_pm.C_scaffold_32000008 Trichoderma reesei fgenesh1_pm.C_scaffold_32000008 N 0.817
fgenesh1_pm.sca_8_chr1_1_0000077 Nectria haematococca fgenesh1_pm.sca_8_chr1_1_0000077 N 0.817
estExt_fgenesh1_pg.C_80160 Trichoderma virens estExt_fgenesh1_pg.C_80160 N 0.803
fgenesh1_pm.C_scaffold_19000008 Trichoderma atroviride fgenesh1_pm.C_scaffold_19000008 N 0.803
GLRG_06288 Colletotrichum graminicola GLRG_06288 N 0.789
MGG_06218 Magnaporthe oryzae MGG_06218 N 0.775
VDBG_05689 Verticillium albo atrum VDBG_05689 N 0.761
VDAG_07628 Verticillium dahliae VDAG_07628 N 0.761
UREG_04006 Uncinocarpus reesii UREG_04006 N 0.746
CPSG_00675 Coccidioides posadasii CPSG_00675 N 0.746
HCAG_04905 Histoplasma capsulatum HCAG_04905 N 0.746
PMAA_039640 Penicillium marneffei PMAA_039640 N 0.746
CIMG_06397 Coccidioides immitis CIMG_06397 N 0.746
TERG_04408 Trichophyton rubrum TERG_04408 N 0.732
TESG_06836 Trichophyton tonsurans TESG_06836 N 0.732
TEQG_06159 Trichophyton equinum TEQG_06159 N 0.732
e_gw1.5.456.1 Mycosphaerella fijiensis e_gw1.5.456.1 N 0.732
TRV_07498 Trichophyton verrucosum TRV_07498 N 0.732
MCYG_02010 Microsporum canis MCYG_02010 N 0.732
BDBG_02675 Blastomyces dermatitidis BDBG_02675 N 0.732
PABG_00017 Paracoccidioides brasiliensis PABG_00017 N 0.732
MGYG_04073 Microsporum gypseum MGYG_04073 N 0.732
ARB_00840 Arthroderma benhamiae ARB_00840 N 0.732
SS1G_02057 Sclerotinia sclerotiorum SS1G_02057 N 0.718
ATEG_09814 Aspergillus terreus CADATEAG00005663 N 0.718
Pc21g14530 Penicillium chrysogenum Pc21g14530 N 0.718
estExt_fgenesh2_pm.C_60019 Thielavia terrestris estExt_fgenesh2_pm.C_60019 N 0.718
AO090003001325 Aspergillus oryzae CADAORAG00001849 N 0.718
fgenesh1_pm.7_#_729 Myceliophthora thermophila fgenesh1_pm.7_#_729 N 0.718
NFIA_040180 Neosartorya fischeri CADNFIAG00003684 N 0.718
ANIA_08038 Aspergillus nidulans CADANIAG00004059 N 0.718
fgenesh1_pm.00168_#_115 Aspergillus carbonarius fgenesh1_pm.00168_#_115 N 0.718
AFLA_025070 Aspergillus flavus CADAFLAG00001883 N 0.718
ACLA_003320 Aspergillus clavatus CADACLAG00000413 N 0.718
AFUA_5G01940 Aspergillus fumigatus CADAFUAG00002843 N 0.718
An16g01800 Aspergillus niger CADANGAG00012651 N 0.718
PTRG_00597 Pyrenophora tritici repentis PTRG_00597 N 0.704
SNOG_09039 Stagonospora nodorum SNOG_09039 N 0.704
Pa_6_11740 Podospora anserina Pa_6_11740 N 0.704
AB09303.1 Alternaria brassicicola AB09303.1 N 0.704
EAT83231.2 Phaeosphaeria nodorum EAT83231.2 N 0.704
estExt_Genewise1Plus.C_570036 Neurospora tetrasperma estExt_Genewise1Plus.C_570036 N 0.704
NCU05343 Neurospora crassa NCU05343 N 0.704
estExt_fgenesh1_pg.C_chr_80368 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80368 N 0.704
estExt_fgenesh1_pm.C_190004 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_190004 N 0.704
estExt_Genewise1.C_110656 Neurospora discreta estExt_Genewise1.C_110656 N 0.704
CHGG_08312 Chaetomium globosum CHGG_08312 N 0.704