CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
CJA14117
(
Caenorhabditis japonica
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CJA14117
T09710_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA14117
CCHC ZF
376
393
RKCFRCGGAGHIAKECTS
Links
Other
CCHC ZF
family RBPs
Other
Caenorhabditis japonica
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CJA00525
Caenorhabditis japonica
CJA00525
N
0.833
CJA21290
Caenorhabditis japonica
CJA21290
N
0.000
CJA23650
Caenorhabditis japonica
CJA23650
N
0.000
CJA26146
Caenorhabditis japonica
CJA26146
N
0.000
CJA27243
Caenorhabditis japonica
CJA27243
N
0.000
CJA28002
Caenorhabditis japonica
CJA28002
N
0.000
CJA28132
Caenorhabditis japonica
CJA28132
N
0.000
CJA29053
Caenorhabditis japonica
CJA29053
N
0.000
CRE09308
Caenorhabditis remanei
CRE09308
N
0.000
CJA18092
Caenorhabditis japonica
CJA18092
N
0.000
CJA15515
Caenorhabditis japonica
CJA15515
N
0.000
CJA02670
Caenorhabditis japonica
CJA02670
N
0.000
CJA04336
Caenorhabditis japonica
CJA04336
N
0.000
CJA05078
Caenorhabditis japonica
CJA05078
N
0.722
CJA10177
Caenorhabditis japonica
CJA10177
N
0.000
CJA11030
Caenorhabditis japonica
CJA11030
N
0.722
CJA13138
Caenorhabditis japonica
CJA13138
N
0.000
CJA13217
Caenorhabditis japonica
CJA13217
N
0.000
CJA15447
Caenorhabditis japonica
CJA15447
N
0.000
CRE13684
Caenorhabditis remanei
CRE13684
N
0.000