CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CRE13684
(
Caenorhabditis remanei
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CRE13684
T09872_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE13684
CCHC ZF
528
545
IKCFKCGGIGHMSRQCTS
Links
Other
CCHC ZF
family RBPs
Other
Caenorhabditis remanei
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CRE09308
Caenorhabditis remanei
CRE09308
N
1.000
CJA10177
Caenorhabditis japonica
CJA10177
N
0.944
CJA23650
Caenorhabditis japonica
CJA23650
N
0.944
CJA27243
Caenorhabditis japonica
CJA27243
N
0.944
CJA02670
Caenorhabditis japonica
CJA02670
N
0.889
CJA26146
Caenorhabditis japonica
CJA26146
N
0.833
CJA11030
Caenorhabditis japonica
CJA11030
N
0.833
CJA05078
Caenorhabditis japonica
CJA05078
N
0.833
CRE03331
Caenorhabditis remanei
CRE03331
N
0.778
CRE06628
Caenorhabditis remanei
CRE06628
N
0.778
CRE29150
Caenorhabditis remanei
CRE29150
N
0.778
CJA15515
Caenorhabditis japonica
CJA15515
N
0.778
CJA04336
Caenorhabditis japonica
CJA04336
N
0.778
CJA29053
Caenorhabditis japonica
CJA29053
N
0.778
CJA10427
Caenorhabditis japonica
CJA10427
N
0.778
CJA28002
Caenorhabditis japonica
CJA28002
N
0.778
CJA18092
Caenorhabditis japonica
CJA18092
N
0.722
CJA21290
Caenorhabditis japonica
CJA21290
N
0.722
CJA28132
Caenorhabditis japonica
CJA28132
N
0.722
CJA13138
Caenorhabditis japonica
CJA13138
N
0.722
CJA00848
Caenorhabditis japonica
CJA00848
N
0.722
CBG08763
Caenorhabditis briggsae
CBG08763
N
0.722
BGIBMGA011784
Bombyx mori
BGIBMGA011784
N
0.722
CRE30341
Caenorhabditis remanei
CRE30341
N
0.722
CJA02757
Caenorhabditis japonica
CJA02757
N
0.722
CJA07934
Caenorhabditis japonica
CJA07934
N
0.722
CJA13676
Caenorhabditis japonica
CJA13676
N
0.722
CJA13503
Caenorhabditis japonica
CJA13503
N
0.722
CRE19609
Caenorhabditis remanei
CRE19609
N
0.722
CJA15447
Caenorhabditis japonica
CJA15447
N
0.722