LOC_Os11g22550 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os11g22550 T12388_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os11g22550.1 CCHC ZF 203 220

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

400 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCAFG00000006386 Canis familiaris ENSCAFG00000006386 I 0.000
ENSCAFG00000010467 Canis familiaris ENSCAFG00000010467 I 0.000
ENSCAFG00000013932 Canis familiaris ENSCAFG00000013932 I 0.000
ENSCAFG00000016707 Canis familiaris ENSCAFG00000016707 I 0.000
ENSCAFG00000024812 Canis familiaris ENSCAFG00000024812 I 0.000
ENSCAFG00000017467 Canis familiaris ENSCAFG00000017467 I 0.000
ENSBTAG00000012763 Bos taurus ENSBTAG00000012763 N 0.000
ENSETEG00000012394 Echinops telfairi ENSETEG00000012394 N 0.000
ENSCPOG00000020972 Cavia porcellus ENSCPOG00000020972 N 0.000
ENSCAFG00000017240 Canis familiaris ENSCAFG00000017240 N 0.000
ENSCAFG00000017180 Canis familiaris ENSCAFG00000017180 N 0.000
ENSCAFG00000000389 Canis familiaris ENSCAFG00000000389 N 0.000
D3ZSC3_RAT Rattus norvegicus ENSRNOG00000027915 N 0.000