B9N3Z3_POPTR (Populus trichocarpa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 POPTR_0005s00240 T12710_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s00240.1 CCHC ZF 754 771

Links

Other CCHC ZF family RBPs
Other Populus trichocarpa RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PGTG_01711 Puccinia graminis PGTG_01711 N 0.000
PGTG_08804 Puccinia graminis PGTG_08804 N 0.000
PGTG_09249 Puccinia graminis PGTG_09249 N 0.000
PGTG_14786 Puccinia graminis PGTG_14786 N 0.000
PTTG_02229 Puccinia triticina PTTG_02229 N 0.000
K08D12.3 Caenorhabditis elegans K08D12.3 N 0.000
Genemark.11725_g Serpula lacrymans Genemark.11725_g N 0.000