BRADI2G57220 (Brachypodium distachyon)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 BRADI2G57220 T18159_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G57220.1 KH 141 199

Links

Other KH family RBPs
Other Brachypodium distachyon RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G09660 Arabidopsis thaliana AT1G09660-TAIR-G N 0.787
cassava411.valid.m1 Manihot esculenta cassava411.valid.m1 N 0.721
cassava412.valid.m1 Manihot esculenta cassava412.valid.m1 N 0.721
Cucsa.114230 Cucumis sativus Cucsa.114230 N 0.787
e_gw1.23.297.1 Selaginella moellendorfii e_gw1.23.297.1 N 0.738
e_gw1.35.311.1 Selaginella moellendorfii e_gw1.35.311.1 N 0.721
estExt_fgenesh1_pm.C_2690009 Physcomitrella patens estExt_fgenesh1_pm.C_2690009 N 0.754
estExt_Genewise1.C_2260018 Physcomitrella patens estExt_Genewise1.C_2260018 N 0.754
mgf006761m Mimulus guttatus mgf006761m N 0.721
GRMZM2G125531 Zea mays GRMZM2G125531 N 0.873
Medtr2g005410 Medicago truncatula Medtr2g005410 N 0.820
Medtr3g016780 Medicago truncatula Medtr3g016780 N 0.721
chr3.CM0047.410.nc Lotus japonicus chr3.CM0047.410.nc N 0.738
cassava410.valid.m1 Manihot esculenta cassava410.valid.m1 N 0.721
cassava13904.valid.m1 Manihot esculenta cassava13904.valid.m1 N 0.800
cassava13307.valid.m1 Manihot esculenta cassava13307.valid.m1 N 0.738
AT4G26480 Arabidopsis thaliana AT4G26480-TAIR-G N 0.738
AT5G56140 Arabidopsis thaliana AT5G56140-TAIR-G N 0.742
BGIOSIBCE004530 Oryza indica BGIOSIBCE004530 N 0.902
BGIOSIBCE019075 Oryza indica BGIOSIBCE019075 N 0.846
XM_002892469.1 Arabidopsis lyrata fgenesh2_kg.1__1021__AT1G09660.1 N 0.787
XM_002867517.1 Arabidopsis lyrata fgenesh2_kg.7__1597__AT4G26480.1 N 0.754
XM_002864390.1 Arabidopsis lyrata fgenesh2_kg.8__1516__AT5G56140.1 N 0.742
GSVIVG00023231001 Vitis vinifera GSVIVG00023231001 N 0.836
LOC_Os01g66300 Oryza sativa LOC_Os01g66300 N 0.902
LOC_Os05g34670 Oryza sativa LOC_Os05g34670 N 0.846
SB03G042090 Sorghum bicolor Sb03g042090 N 0.885
cassava13306.valid.m1 Manihot esculenta cassava13306.valid.m1 N 0.738
MDP0000306088 Malus x domestica MDP0000306088 N 0.746