CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FMR1
(
Otolemur garnettii
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSOGAG00000013061
T19234_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000011701
KH
154
213
HEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFL
ENSOGAP00000011701
KH
218
264
DVIQVLXXXXXKVIGKNGKLIQEIVDKSGVVRVRIEAENEKNVPQEE
Links
Other
KH
family RBPs
Other
Otolemur garnettii
RBPs
37 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FMR1
Homo sapiens
ENSG00000102081
D
0.877
Q2KHP9
Xenopus laevis
Q2KHP9
I
0.715
fmr1
Xenopus tropicalis
ENSXETG00000019647
I
0.708
FMR1
Macaca mulatta
ENSMMUG00000015814
I
0.877
Fmr1
Mus musculus
ENSMUSG00000000838
I
0.861
FMR1
Ornithorhynchus anatinus
ENSOANG00000001097
I
0.842
FMR1
Vicugna pacos
ENSVPAG00000008700
I
0.719
FMR1
Tursiops truncatus
ENSTTRG00000000613
I
0.813
ENSPPYG00000020797
Pongo pygmaeus
ENSPPYG00000020797
I
0.787
FMR1
Pan troglodytes
ENSPTRG00000022349
I
0.877
FMR1
Pteropus vampyrus
ENSPVAG00000013386
I
0.719
FMR1_RAT
Rattus norvegicus
ENSRNOG00000011900
I
0.832
Ame_R006793
Ailuropoda melanoleuca
Ame_R006793
I
0.712
AAC59683
Xenopus laevis
AAC59683
I
0.715
P51113
Xenopus laevis
P51113
I
0.715
FMR1
Canis familiaris
ENSCAFG00000019085
I
0.884
LOC100414871
Callithrix jacchus
ENSCJAG00000003925
I
0.885
AAI70204
Xenopus laevis
AAI70204
I
0.715
FXR1
Dasypus novemcinctus
ENSDNOG00000019065
I
0.730
Fxr1
Dipodomys ordii
ENSDORG00000005853
I
0.730
AAI12953
Xenopus laevis
AAI12953
I
0.715
FMR1
Echinops telfairi
ENSETEG00000006061
I
0.758
FMR1
Felis catus
ENSFCAG00000007228
I
0.723
Q5ZHM3_CHICK
Gallus gallus
ENSGALG00000009177
I
0.744
FMR1
Sus scrofa
ENSSSCG00000012727
I
0.725
FMR1
Spermophilus tridecemlineatus
ENSSTOG00000003260
N
0.862
FMR1
Sorex araneus
ENSSARG00000003475
N
0.908
Q0II33_BOVIN
Bos taurus
ENSBTAG00000012552
N
0.853
FMR1
Cavia porcellus
ENSCPOG00000003723
N
0.847
Fmr1
Dipodomys ordii
ENSDORG00000012501
N
0.892
FMR1
Gorilla gorilla
ENSGGOG00000010373
N
0.893
FMR1
Loxodonta africana
ENSLAFG00000013592
N
0.862
FMR1
Meleagris gallopavo
ENSMGAG00000008270
N
0.793
FMR1
Oryctolagus cuniculus
ENSOCUG00000014621
N
0.876
FMR1
Ochotona princeps
ENSOPRG00000012759
N
0.875
FMR1
Procavia capensis
ENSPCAG00000011936
N
0.846
FMR1
Anolis carolinensis
ENSACAG00000007899
N
0.802