FMR1 (Pteropus vampyrus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSPVAG00000013386 T19415_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FMR1
M016_0.6 		Homo sapiens KGACARG RNAcompete
Ray et al.(2013)
RNCMPT00016 		0.753
FMR1
M305_0.6 		Homo sapiens Sequence logo not available KAGCGRCUGG SELEX
Cook et al.(2011)
471_15805463.1 		0.753
FMR1
M304_0.6 		Homo sapiens Sequence logo not available GGGCKAAGGARK SELEX
Cook et al.(2011)
471_15805463 		0.753
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000012624 KH 220 279
ENSPVAP00000012624 KH 283 361

Links

Other KH family RBPs
Other Pteropus vampyrus RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FMR1 Homo sapiens ENSG00000102081 D 0.820
Ame_R006793 Ailuropoda melanoleuca Ame_R006793 I 0.971
Fmr1 Mus musculus ENSMUSG00000000838 I 0.820
FMR1 Ornithorhynchus anatinus ENSOANG00000001097 I 0.777
ENSPPYG00000020797 Pongo pygmaeus ENSPPYG00000020797 I 0.878
FMR1 Pan troglodytes ENSPTRG00000022349 I 0.820
FMR1_RAT Rattus norvegicus ENSRNOG00000011900 I 0.820
FMR1 Sus scrofa ENSSSCG00000012727 I 0.971
FMR1 Tursiops truncatus ENSTTRG00000000613 I 0.871
FMR1 Vicugna pacos ENSVPAG00000008700 I 0.978
FMR1 Macaca mulatta ENSMMUG00000015814 I 0.820
FMR1 Dasypus novemcinctus ENSDNOG00000019486 I 0.892
FMR1 Canis familiaris ENSCAFG00000019085 I 0.799
FMR1 Felis catus ENSFCAG00000007228 I 0.957
FMR1 Echinops telfairi ENSETEG00000006061 I 0.878
LOC100414871 Callithrix jacchus ENSCJAG00000003925 I 0.820
FMR1 Cavia porcellus ENSCPOG00000003723 N 0.842
FMR1 Sorex araneus ENSSARG00000003475 N 0.770
FMR1 Spermophilus tridecemlineatus ENSSTOG00000003260 N 0.827
Q0II33_BOVIN Bos taurus ENSBTAG00000012552 N 0.820
FMR1 Loxodonta africana ENSLAFG00000013592 N 0.827
Fmr1 Dipodomys ordii ENSDORG00000012501 N 0.791
FMR1 Procavia capensis ENSPCAG00000011936 N 0.827
FMR1 Ochotona princeps ENSOPRG00000012759 N 0.791
FMR1 Otolemur garnettii ENSOGAG00000013061 N 0.719
FMR1 Oryctolagus cuniculus ENSOCUG00000014621 N 0.813
FMR1 Gorilla gorilla ENSGGOG00000010373 N 0.820
FMR1 Meleagris gallopavo ENSMGAG00000008270 N 0.748
FMR1 Anolis carolinensis ENSACAG00000007899 N 0.770