CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GL27239
(
Drosophila persimilis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0164820
T19931_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0191346
KH
604
661
SETISVEPHQRSQLIGPSGLHMKRIYLETGATLTAADESHFAVFAPSQAAMDEAKELI
Links
Other
KH
family RBPs
Other
Drosophila persimilis
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
msi
Drosophila melanogaster
FBgn0011666
D
0.000
CpipJ_CPIJ006948
Culex pipiens
CpipJ_CPIJ006948
I
0.000
GA27393-RA
Drosophila pseudoobscura
FBgn0248760
I
0.000
GE23609
Drosophila yakuba
FBgn0240782
I
0.000
GK12850
Drosophila willistoni
FBgn0214859
I
0.000
GM10251
Drosophila sechellia
FBgn0165202
I
0.000
GI22407
Drosophila mojavensis
FBgn0145135
I
0.000
GH18982
Drosophila grimshawi
FBgn0126449
I
0.000
GG11413
Drosophila erecta
FBgn0103713
I
0.000
GF17697
Drosophila ananassae
FBgn0094715
I
0.000
CPIJ006948
Culex quinquefasciatus
CPIJ006948
I
0.000
AGAP001993
Anopheles gambiae
AGAP001993
I
0.000
AAEL006057
Aedes aegypti
AAEL006057
I
0.000
nasonia_NCBI_hmm958624
Nasonia vitripennis
nasonia_NCBI_hmm958624
I
0.000
DGIL_AUG5s2560g3t3
Acyrtosiphon pisum
DGIL_AUG5s2560g3t3
I
0.000
amel4_ncbi_hmm946
Apis mellifera
amel4_ncbi_hmm946
I
0.000
e_gw1.7.478.1
Daphnia pulex
e_gw1.7.478.1
I
0.000