CpipJ_CPIJ006948 (Culex pipiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CpipJ_CPIJ006948 T28919_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
msi
M096_0.6 		Drosophila melanogaster AGUAGGD RNAcompete
Ray et al.(2013)
RNCMPT00100 		0.921
msi
M095_0.6 		Drosophila melanogaster AGUAGKD RNAcompete
Ray et al.(2013)
RNCMPT00099 		0.921
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ006948-RA RRM 169 238
CpipJ_CPIJ006948-RA RRM 258 327

Links

Other RRM family RBPs
Other Culex pipiens RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CPIJ006948 Culex quinquefasciatus CPIJ006948 I 1.000
AAEL006057 Aedes aegypti AAEL006057 I 0.979
AGAP001993 Anopheles gambiae AGAP001993 I 0.964
GK12850 Drosophila willistoni FBgn0214859 I 0.929
nasonia_NCBI_hmm958624 Nasonia vitripennis nasonia_NCBI_hmm958624 I 0.929
GH18982 Drosophila grimshawi FBgn0126449 I 0.929
GI22407 Drosophila mojavensis FBgn0145135 I 0.929
GE23609 Drosophila yakuba FBgn0240782 I 0.921
GM10251 Drosophila sechellia FBgn0165202 I 0.921
GG11413 Drosophila erecta FBgn0103713 I 0.921
GF17697 Drosophila ananassae FBgn0094715 I 0.921
msi Drosophila melanogaster FBgn0011666 D 0.921
GA27393-RA Drosophila pseudoobscura FBgn0248760 I 0.907
PHUM361200 Pediculus humanus PHUM361200 I 0.844
amel4_ncbi_hmm946 Apis mellifera amel4_ncbi_hmm946 I 0.843
DGIL_AUG5s2560g3t3 Acyrtosiphon pisum DGIL_AUG5s2560g3t3 I 0.816
e_gw1.7.478.1 Daphnia pulex e_gw1.7.478.1 I 0.780