DGIL_AUG5s2560g3t3 (Acyrtosiphon pisum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 DGIL_AUG5s2560g3t3 T32049_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
msi
M096_0.6 		Drosophila melanogaster AGUAGGD RNAcompete
Ray et al.(2013)
RNCMPT00100 		0.864
msi
M095_0.6 		Drosophila melanogaster AGUAGKD RNAcompete
Ray et al.(2013)
RNCMPT00099 		0.864
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
DGIL_AUG5s2560g3t3 RRM 140 209
DGIL_AUG5s2560g3t3 RRM 228 297

Links

Other RRM family RBPs
Other Acyrtosiphon pisum RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
msi Drosophila melanogaster FBgn0011666 D 0.837
GG11413 Drosophila erecta FBgn0103713 I 0.837
GE23609 Drosophila yakuba FBgn0240782 I 0.837
GA27393-RA Drosophila pseudoobscura FBgn0248760 I 0.837
GM10251 Drosophila sechellia FBgn0165202 I 0.837
GK12850 Drosophila willistoni FBgn0214859 I 0.830
GH18982 Drosophila grimshawi FBgn0126449 I 0.830
GI22407 Drosophila mojavensis FBgn0145135 I 0.830
GF17697 Drosophila ananassae FBgn0094715 I 0.830
AGAP001993 Anopheles gambiae AGAP001993 I 0.823
CpipJ_CPIJ006948 Culex pipiens CpipJ_CPIJ006948 I 0.816
CPIJ006948 Culex quinquefasciatus CPIJ006948 I 0.816
PHUM361200 Pediculus humanus PHUM361200 I 0.814
AAEL006057 Aedes aegypti AAEL006057 I 0.809
nasonia_NCBI_hmm958624 Nasonia vitripennis nasonia_NCBI_hmm958624 I 0.801
e_gw1.7.478.1 Daphnia pulex e_gw1.7.478.1 I 0.786
amel4_ncbi_hmm946 Apis mellifera amel4_ncbi_hmm946 I 0.730