CHGG_08209 (Chaetomium globosum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CHGG_08209 T28627_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CHGT_08209 RRM 185 253
CHGT_08209 RRM 283 352
CHGT_08209 RRM 511 567

Links

Other RRM family RBPs
Other Chaetomium globosum RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PMAA_065980 Penicillium marneffei PMAA_065980 N 0.867
estExt_fgenesh2_pm.C_60094 Thielavia terrestris estExt_fgenesh2_pm.C_60094 N 0.964
estExt_fgenesh1_pg.C_70696 Myceliophthora thermophila estExt_fgenesh1_pg.C_70696 N 0.969
e_gw1.12.188.1 Trichoderma atroviride e_gw1.12.188.1 N 0.898
Pad-1 Neurospora crassa NCU03491 N 0.944
NFIA_009510 Neosartorya fischeri CADNFIAG00001864 N 0.862
ATEG_05213 Aspergillus terreus CADATEAG00005232 N 0.867
AO090005001118 Aspergillus oryzae CADAORAG00003032 N 0.862
ANIA_00917 Aspergillus nidulans CADANIAG00001739 N 0.847
An01g14180 Aspergillus niger CADANGAG00001415 N 0.862
estExt_fgenesh5_pg.C_10453 Trichoderma reesei estExt_fgenesh5_pg.C_10453 N 0.908
estExt_Genewise1Plus.C_100357 Neurospora tetrasperma estExt_Genewise1Plus.C_100357 N 0.944
Pc16g14480 Penicillium chrysogenum Pc16g14480 N 0.791
Pa_6_4410 Podospora anserina Pa_6_4410 N 0.949
GSTUMT00004251001 Tuber melanosporum GSTUMT00004251001 N 0.827
estExt_fgenesh1_pm.C_20497 Cryphonectria parasitica estExt_fgenesh1_pm.C_20497 N 0.852
e_gw1.00042.124.1 Aspergillus carbonarius e_gw1.00042.124.1 N 0.867
estExt_Genewise1Plus.C_sca_3_chr4_2_00461 Nectria haematococca estExt_Genewise1Plus.C_sca_3_chr4_2_00461 N 0.898
estExt_Genewise1Plus.C_320091 Mycosphaerella fijiensis estExt_Genewise1Plus.C_320091 N 0.761
estExt_Genewise1Plus.C_20716 Trichoderma virens estExt_Genewise1Plus.C_20716 N 0.903
estExt_Genewise1Plus.C_160212 Neurospora discreta estExt_Genewise1Plus.C_160212 N 0.944
AFUA_1G15810 Aspergillus fumigatus CADAFUAG00006904 N 0.862
AFLA_083600 Aspergillus flavus CADAFLAG00001140 N 0.862
ACLA_019550 Aspergillus clavatus CADACLAG00002508 N 0.872
HCAG_02257 Histoplasma capsulatum HCAG_02257 N 0.847
GLRG_08678 Colletotrichum graminicola GLRG_08678 N 0.862
FVEG_04832 Fusarium verticillioides FVEG_04832 N 0.903
FOXG_07909 Fusarium oxysporum FOXG_07909 N 0.903
FGSG_05165 Fusarium graminearum FGSG_05165 N 0.898
CPSG_04315 Coccidioides posadasii CPSG_04315 N 0.857
CIMG_03100 Coccidioides immitis CIMG_03100 N 0.857
BDBG_07521 Blastomyces dermatitidis BDBG_07521 N 0.847
BC1G_00662 Botrytis cinerea BC1G_00662 N 0.883
MCYG_00053 Microsporum canis MCYG_00053 N 0.847
MGG_12101 Magnaporthe oryzae MGG_12101 N 0.811
VDAG_07019 Verticillium dahliae VDAG_07019 N 0.883
UREG_02855 Uncinocarpus reesii UREG_02855 N 0.857
TRV_02070 Trichophyton verrucosum TRV_02070 N 0.852
TESG_03203 Trichophyton tonsurans TESG_03203 N 0.852
TERG_08096 Trichophyton rubrum TERG_08096 N 0.852
TEQG_08002 Trichophyton equinum TEQG_08002 N 0.852
SS1G_00444 Sclerotinia sclerotiorum SS1G_00444 N 0.883
PABG_06048 Paracoccidioides brasiliensis PABG_06048 N 0.852
MGYG_07158 Microsporum gypseum MGYG_07158 N 0.852
ARB_02131 Arthroderma benhamiae ARB_02131 N 0.852