GLRG_08999 (Colletotrichum graminicola)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GLRG_08999 T29436_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GLRG_08999T0 RRM 61 128
GLRG_08999T0 RRM 154 225
GLRG_08999T0 RRM 296 360

Links

Other RRM family RBPs
Other Colletotrichum graminicola RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PMAA_010670 Penicillium marneffei PMAA_010670 N 0.845
estExt_Genewise1.C_90098 Mycosphaerella fijiensis estExt_Genewise1.C_90098 N 0.803
estExt_Genewise1.C_80620 Trichoderma atroviride estExt_Genewise1.C_80620 N 0.913
estExt_Genewise1.C_280098 Cochliobolus heterostrophus C5 estExt_Genewise1.C_280098 N 0.797
estExt_Genewise1.C_22136 Myceliophthora thermophila estExt_Genewise1.C_22136 N 0.869
estExt_fgenesh2_pg.C_40625 Neurospora discreta estExt_fgenesh2_pg.C_40625 N 0.879
estExt_fgenesh2_kg.C_40081 Thielavia terrestris estExt_fgenesh2_kg.C_40081 N 0.854
estExt_fgenesh1_pm.C_520029 Neurospora tetrasperma estExt_fgenesh1_pm.C_520029 N 0.879
e_gw1.3.851.1 Trichoderma reesei e_gw1.3.851.1 N 0.927
NCU00768 Neurospora crassa NCU00768 N 0.879
estExt_Genewise1Plus.C_chr_10431 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_10431 N 0.798
estExt_Genewise1Plus.C_sca_18_chr2_1_00442 Nectria haematococca estExt_Genewise1Plus.C_sca_18_chr2_1_00442 N 0.932
Pc21g11890 Penicillium chrysogenum Pc21g11890 N 0.841
Pa_1_5920 Podospora anserina Pa_1_5920 N 0.883
GSTUMT00001670001 Tuber melanosporum GSTUMT00001670001 N 0.845
fgenesh1_pm.00868_#_106 Aspergillus carbonarius fgenesh1_pm.00868_#_106 N 0.837
estExt_Genewise1Plus.C_61164 Cryphonectria parasitica estExt_Genewise1Plus.C_61164 N 0.841
PredSwiss_CON474.2 Pneumocystis carinii PredSwiss_CON474.2 N 0.794
PredSwiss_ASS2010_2387.1 Pneumocystis carinii PredSwiss_ASS2010_2387.1 N 0.785
EAT81253.1 Phaeosphaeria nodorum EAT81253.1 N 0.796
gw1.13.164.1 Trichoderma virens gw1.13.164.1 N 0.927
NFIA_114950 Neosartorya fischeri CADNFIAG00010593 N 0.845
AO090038000602 Aspergillus oryzae CADAORAG00009349 N 0.845
ANIA_09090 Aspergillus nidulans CADANIAG00009524 N 0.837
MGG_08741 Magnaporthe oryzae MGG_08741 N 0.917
HCAG_04410 Histoplasma capsulatum HCAG_04410 N 0.836
FVEG_05907 Fusarium verticillioides FVEG_05907 N 0.898
FOXG_08762 Fusarium oxysporum FOXG_08762 N 0.908
FGSG_05737 Fusarium graminearum FGSG_05737 N 0.922
CPSG_09340 Coccidioides posadasii CPSG_09340 N 0.836
CIMG_07756 Coccidioides immitis CIMG_07756 N 0.836
BDBG_04017 Blastomyces dermatitidis BDBG_04017 N 0.845
BC1G_12954 Botrytis cinerea BC1G_12954 N 0.850
MGYG_05892 Microsporum gypseum MGYG_05892 N 0.831
PABG_01162 Paracoccidioides brasiliensis PABG_01162 N 0.845
An12g00410 Aspergillus niger CADANGAG00009490 N 0.841
AFUA_7G02230 Aspergillus fumigatus CADAFUAG00001190 N 0.845
AFLA_071390 Aspergillus flavus CADAFLAG00008563 N 0.831
ACLA_065300 Aspergillus clavatus CADACLAG00006222 N 0.845
VDBG_02406 Verticillium albo atrum VDBG_02406 N 0.941
VDAG_02878 Verticillium dahliae VDAG_02878 N 0.941
UREG_02108 Uncinocarpus reesii UREG_02108 N 0.836
SNOG_11545 Stagonospora nodorum SNOG_11545 N 0.796
PTRG_04758 Pyrenophora tritici repentis PTRG_04758 N 0.792
ARB_04665 Arthroderma benhamiae ARB_04665 N 0.821