SNOG_11545 (Stagonospora nodorum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SNOG_11545 T30631_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SNOT_11545 RRM 63 129
SNOT_11545 RRM 156 227
SNOT_11545 RRM 288 352

Links

Other RRM family RBPs
Other Stagonospora nodorum RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
EAT81253.1 Phaeosphaeria nodorum EAT81253.1 N 1.000
estExt_Genewise1.C_280098 Cochliobolus heterostrophus C5 estExt_Genewise1.C_280098 N 0.956
PTRG_04758 Pyrenophora tritici repentis PTRG_04758 N 0.951
estExt_Genewise1.C_90098 Mycosphaerella fijiensis estExt_Genewise1.C_90098 N 0.879
AFUA_7G02230 Aspergillus fumigatus CADAFUAG00001190 N 0.878
UREG_02108 Uncinocarpus reesii UREG_02108 N 0.878
CPSG_09340 Coccidioides posadasii CPSG_09340 N 0.878
CIMG_07756 Coccidioides immitis CIMG_07756 N 0.878
estExt_Genewise1Plus.C_chr_10431 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_10431 N 0.874
ACLA_065300 Aspergillus clavatus CADACLAG00006222 N 0.873
NFIA_114950 Neosartorya fischeri CADNFIAG00010593 N 0.873
BC1G_12954 Botrytis cinerea BC1G_12954 N 0.868
AO090038000602 Aspergillus oryzae CADAORAG00009349 N 0.868
An12g00410 Aspergillus niger CADANGAG00009490 N 0.868
Pc21g11890 Penicillium chrysogenum Pc21g11890 N 0.864
fgenesh1_pm.00868_#_106 Aspergillus carbonarius fgenesh1_pm.00868_#_106 N 0.864
ANIA_09090 Aspergillus nidulans CADANIAG00009524 N 0.864
BDBG_04017 Blastomyces dermatitidis BDBG_04017 N 0.863
AFLA_071390 Aspergillus flavus CADAFLAG00008563 N 0.863
PABG_01162 Paracoccidioides brasiliensis PABG_01162 N 0.863
GSTUMT00001670001 Tuber melanosporum GSTUMT00001670001 N 0.863
HCAG_04410 Histoplasma capsulatum HCAG_04410 N 0.854
PMAA_010670 Penicillium marneffei PMAA_010670 N 0.854
MGYG_05892 Microsporum gypseum MGYG_05892 N 0.849
ARB_04665 Arthroderma benhamiae ARB_04665 N 0.834
gw1.13.164.1 Trichoderma virens gw1.13.164.1 N 0.810
e_gw1.3.851.1 Trichoderma reesei e_gw1.3.851.1 N 0.810
estExt_Genewise1.C_80620 Trichoderma atroviride estExt_Genewise1.C_80620 N 0.806
estExt_Genewise1Plus.C_sca_18_chr2_1_00442 Nectria haematococca estExt_Genewise1Plus.C_sca_18_chr2_1_00442 N 0.805
MGG_08741 Magnaporthe oryzae MGG_08741 N 0.801
Pa_1_5920 Podospora anserina Pa_1_5920 N 0.800
PredSwiss_CON474.2 Pneumocystis carinii PredSwiss_CON474.2 N 0.797
GLRG_08999 Colletotrichum graminicola GLRG_08999 N 0.796
FGSG_05737 Fusarium graminearum FGSG_05737 N 0.795
VDBG_02406 Verticillium albo atrum VDBG_02406 N 0.791
VDAG_02878 Verticillium dahliae VDAG_02878 N 0.791
NCU00768 Neurospora crassa NCU00768 N 0.790
estExt_fgenesh1_pm.C_520029 Neurospora tetrasperma estExt_fgenesh1_pm.C_520029 N 0.790
estExt_fgenesh2_pg.C_40625 Neurospora discreta estExt_fgenesh2_pg.C_40625 N 0.790
PredSwiss_ASS2010_2387.1 Pneumocystis carinii PredSwiss_ASS2010_2387.1 N 0.787
estExt_Genewise1Plus.C_61164 Cryphonectria parasitica estExt_Genewise1Plus.C_61164 N 0.783
FOXG_08762 Fusarium oxysporum FOXG_08762 N 0.782
estExt_Genewise1.C_22136 Myceliophthora thermophila estExt_Genewise1.C_22136 N 0.777
FVEG_05907 Fusarium verticillioides FVEG_05907 N 0.772
estExt_fgenesh2_kg.C_40081 Thielavia terrestris estExt_fgenesh2_kg.C_40081 N 0.751
SJAG_00474 Schizosaccharomyces japonicus SJAG_00474 N 0.727