PTRG_04758 (Pyrenophora tritici repentis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PTRG_04758 T30217_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PTRT_04758 RRM 67 134
PTRT_04758 RRM 178 249
PTRT_04758 RRM 310 374

Links

Other RRM family RBPs
Other Pyrenophora tritici repentis RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1.C_280098 Cochliobolus heterostrophus C5 estExt_Genewise1.C_280098 N 0.976
SNOG_11545 Stagonospora nodorum SNOG_11545 N 0.951
EAT81253.1 Phaeosphaeria nodorum EAT81253.1 N 0.951
estExt_Genewise1.C_90098 Mycosphaerella fijiensis estExt_Genewise1.C_90098 N 0.879
BC1G_12954 Botrytis cinerea BC1G_12954 N 0.874
ACLA_065300 Aspergillus clavatus CADACLAG00006222 N 0.874
NFIA_114950 Neosartorya fischeri CADNFIAG00010593 N 0.874
estExt_Genewise1Plus.C_chr_10431 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_10431 N 0.874
fgenesh1_pm.00868_#_106 Aspergillus carbonarius fgenesh1_pm.00868_#_106 N 0.869
CIMG_07756 Coccidioides immitis CIMG_07756 N 0.869
CPSG_09340 Coccidioides posadasii CPSG_09340 N 0.869
AFUA_7G02230 Aspergillus fumigatus CADAFUAG00001190 N 0.869
UREG_02108 Uncinocarpus reesii UREG_02108 N 0.869
An12g00410 Aspergillus niger CADANGAG00009490 N 0.869
ANIA_09090 Aspergillus nidulans CADANIAG00009524 N 0.869
Pc21g11890 Penicillium chrysogenum Pc21g11890 N 0.869
AO090038000602 Aspergillus oryzae CADAORAG00009349 N 0.859
AFLA_071390 Aspergillus flavus CADAFLAG00008563 N 0.854
PABG_01162 Paracoccidioides brasiliensis PABG_01162 N 0.854
GSTUMT00001670001 Tuber melanosporum GSTUMT00001670001 N 0.854
BDBG_04017 Blastomyces dermatitidis BDBG_04017 N 0.850
PMAA_010670 Penicillium marneffei PMAA_010670 N 0.845
HCAG_04410 Histoplasma capsulatum HCAG_04410 N 0.840
MGYG_05892 Microsporum gypseum MGYG_05892 N 0.840
ARB_04665 Arthroderma benhamiae ARB_04665 N 0.835
estExt_Genewise1Plus.C_sca_18_chr2_1_00442 Nectria haematococca estExt_Genewise1Plus.C_sca_18_chr2_1_00442 N 0.806
gw1.13.164.1 Trichoderma virens gw1.13.164.1 N 0.806
e_gw1.3.851.1 Trichoderma reesei e_gw1.3.851.1 N 0.806
MGG_08741 Magnaporthe oryzae MGG_08741 N 0.797
VDBG_02406 Verticillium albo atrum VDBG_02406 N 0.792
PredSwiss_CON474.2 Pneumocystis carinii PredSwiss_CON474.2 N 0.792
GLRG_08999 Colletotrichum graminicola GLRG_08999 N 0.792
VDAG_02878 Verticillium dahliae VDAG_02878 N 0.792
estExt_Genewise1.C_80620 Trichoderma atroviride estExt_Genewise1.C_80620 N 0.792
FGSG_05737 Fusarium graminearum FGSG_05737 N 0.791
PredSwiss_ASS2010_2387.1 Pneumocystis carinii PredSwiss_ASS2010_2387.1 N 0.787
NCU00768 Neurospora crassa NCU00768 N 0.777
estExt_fgenesh2_pg.C_40625 Neurospora discreta estExt_fgenesh2_pg.C_40625 N 0.777
Pa_1_5920 Podospora anserina Pa_1_5920 N 0.777
estExt_fgenesh1_pm.C_520029 Neurospora tetrasperma estExt_fgenesh1_pm.C_520029 N 0.777
FOXG_08762 Fusarium oxysporum FOXG_08762 N 0.773
estExt_Genewise1Plus.C_61164 Cryphonectria parasitica estExt_Genewise1Plus.C_61164 N 0.769
FVEG_05907 Fusarium verticillioides FVEG_05907 N 0.763
estExt_Genewise1.C_22136 Myceliophthora thermophila estExt_Genewise1.C_22136 N 0.754
estExt_fgenesh2_kg.C_40081 Thielavia terrestris estExt_fgenesh2_kg.C_40081 N 0.743
SJAG_00474 Schizosaccharomyces japonicus SJAG_00474 N 0.722