e_gw1.3.851.1 (Trichoderma reesei)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.3.851.1 T49987_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.3.851.1 RRM 70 137
e_gw1.3.851.1 RRM 163 234
e_gw1.3.851.1 RRM 305 369

Links

Other RRM family RBPs
Other Trichoderma reesei RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.13.164.1 Trichoderma virens gw1.13.164.1 N 1.000
estExt_Genewise1Plus.C_sca_18_chr2_1_00442 Nectria haematococca estExt_Genewise1Plus.C_sca_18_chr2_1_00442 N 0.990
estExt_Genewise1.C_80620 Trichoderma atroviride estExt_Genewise1.C_80620 N 0.966
FGSG_05737 Fusarium graminearum FGSG_05737 N 0.951
FOXG_08762 Fusarium oxysporum FOXG_08762 N 0.942
FVEG_05907 Fusarium verticillioides FVEG_05907 N 0.927
GLRG_08999 Colletotrichum graminicola GLRG_08999 N 0.927
VDBG_02406 Verticillium albo atrum VDBG_02406 N 0.917
VDAG_02878 Verticillium dahliae VDAG_02878 N 0.917
estExt_fgenesh1_pm.C_520029 Neurospora tetrasperma estExt_fgenesh1_pm.C_520029 N 0.907
Pa_1_5920 Podospora anserina Pa_1_5920 N 0.907
NCU00768 Neurospora crassa NCU00768 N 0.907
estExt_fgenesh2_pg.C_40625 Neurospora discreta estExt_fgenesh2_pg.C_40625 N 0.907
MGG_08741 Magnaporthe oryzae MGG_08741 N 0.898
estExt_fgenesh2_kg.C_40081 Thielavia terrestris estExt_fgenesh2_kg.C_40081 N 0.883
estExt_Genewise1.C_22136 Myceliophthora thermophila estExt_Genewise1.C_22136 N 0.879
ACLA_065300 Aspergillus clavatus CADACLAG00006222 N 0.869
NFIA_114950 Neosartorya fischeri CADNFIAG00010593 N 0.869
Pc21g11890 Penicillium chrysogenum Pc21g11890 N 0.865
AFUA_7G02230 Aspergillus fumigatus CADAFUAG00001190 N 0.864
AO090038000602 Aspergillus oryzae CADAORAG00009349 N 0.864
An12g00410 Aspergillus niger CADANGAG00009490 N 0.864
UREG_02108 Uncinocarpus reesii UREG_02108 N 0.864
CIMG_07756 Coccidioides immitis CIMG_07756 N 0.864
BDBG_04017 Blastomyces dermatitidis BDBG_04017 N 0.864
CPSG_09340 Coccidioides posadasii CPSG_09340 N 0.864
fgenesh1_pm.00868_#_106 Aspergillus carbonarius fgenesh1_pm.00868_#_106 N 0.860
ANIA_09090 Aspergillus nidulans CADANIAG00009524 N 0.860
PMAA_010670 Penicillium marneffei PMAA_010670 N 0.859
PABG_01162 Paracoccidioides brasiliensis PABG_01162 N 0.859
GSTUMT00001670001 Tuber melanosporum GSTUMT00001670001 N 0.859
MGYG_05892 Microsporum gypseum MGYG_05892 N 0.854
HCAG_04410 Histoplasma capsulatum HCAG_04410 N 0.854
estExt_Genewise1Plus.C_61164 Cryphonectria parasitica estExt_Genewise1Plus.C_61164 N 0.850
AFLA_071390 Aspergillus flavus CADAFLAG00008563 N 0.850
BC1G_12954 Botrytis cinerea BC1G_12954 N 0.845
ARB_04665 Arthroderma benhamiae ARB_04665 N 0.840
estExt_Genewise1.C_90098 Mycosphaerella fijiensis estExt_Genewise1.C_90098 N 0.816
estExt_Genewise1.C_280098 Cochliobolus heterostrophus C5 estExt_Genewise1.C_280098 N 0.816
estExt_Genewise1Plus.C_chr_10431 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_10431 N 0.812
EAT81253.1 Phaeosphaeria nodorum EAT81253.1 N 0.810
SNOG_11545 Stagonospora nodorum SNOG_11545 N 0.810
PTRG_04758 Pyrenophora tritici repentis PTRG_04758 N 0.806
PredSwiss_CON474.2 Pneumocystis carinii PredSwiss_CON474.2 N 0.798
PredSwiss_ASS2010_2387.1 Pneumocystis carinii PredSwiss_ASS2010_2387.1 N 0.788
SJAG_00474 Schizosaccharomyces japonicus SJAG_00474 N 0.714