estExt_Genewise1Plus.C_61164 (Cryphonectria parasitica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1Plus.C_61164 T56491_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_61164 RRM 22 91
estExt_Genewise1Plus.C_61164 RRM 116 187
estExt_Genewise1Plus.C_61164 RRM 258 322

Links

Other RRM family RBPs
Other Cryphonectria parasitica RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.3.851.1 Trichoderma reesei e_gw1.3.851.1 N 0.850
gw1.13.164.1 Trichoderma virens gw1.13.164.1 N 0.850
estExt_Genewise1Plus.C_sca_18_chr2_1_00442 Nectria haematococca estExt_Genewise1Plus.C_sca_18_chr2_1_00442 N 0.850
Pa_1_5920 Podospora anserina Pa_1_5920 N 0.845
NCU00768 Neurospora crassa NCU00768 N 0.841
VDBG_02406 Verticillium albo atrum VDBG_02406 N 0.841
estExt_Genewise1.C_80620 Trichoderma atroviride estExt_Genewise1.C_80620 N 0.841
GLRG_08999 Colletotrichum graminicola GLRG_08999 N 0.841
estExt_fgenesh2_pg.C_40625 Neurospora discreta estExt_fgenesh2_pg.C_40625 N 0.841
estExt_fgenesh1_pm.C_520029 Neurospora tetrasperma estExt_fgenesh1_pm.C_520029 N 0.841
VDAG_02878 Verticillium dahliae VDAG_02878 N 0.841
FGSG_05737 Fusarium graminearum FGSG_05737 N 0.836
MGG_08741 Magnaporthe oryzae MGG_08741 N 0.836
estExt_Genewise1.C_22136 Myceliophthora thermophila estExt_Genewise1.C_22136 N 0.831
FOXG_08762 Fusarium oxysporum FOXG_08762 N 0.826
estExt_fgenesh2_kg.C_40081 Thielavia terrestris estExt_fgenesh2_kg.C_40081 N 0.821
FVEG_05907 Fusarium verticillioides FVEG_05907 N 0.816
GSTUMT00001670001 Tuber melanosporum GSTUMT00001670001 N 0.816
An12g00410 Aspergillus niger CADANGAG00009490 N 0.812
fgenesh1_pm.00868_#_106 Aspergillus carbonarius fgenesh1_pm.00868_#_106 N 0.809
ANIA_09090 Aspergillus nidulans CADANIAG00009524 N 0.809
AFUA_7G02230 Aspergillus fumigatus CADAFUAG00001190 N 0.808
PABG_01162 Paracoccidioides brasiliensis PABG_01162 N 0.808
NFIA_114950 Neosartorya fischeri CADNFIAG00010593 N 0.808
ACLA_065300 Aspergillus clavatus CADACLAG00006222 N 0.808
BDBG_04017 Blastomyces dermatitidis BDBG_04017 N 0.808
AO090038000602 Aspergillus oryzae CADAORAG00009349 N 0.808
Pc21g11890 Penicillium chrysogenum Pc21g11890 N 0.804
AFLA_071390 Aspergillus flavus CADAFLAG00008563 N 0.803
PMAA_010670 Penicillium marneffei PMAA_010670 N 0.803
BC1G_12954 Botrytis cinerea BC1G_12954 N 0.802
CIMG_07756 Coccidioides immitis CIMG_07756 N 0.798
HCAG_04410 Histoplasma capsulatum HCAG_04410 N 0.798
MGYG_05892 Microsporum gypseum MGYG_05892 N 0.798
CPSG_09340 Coccidioides posadasii CPSG_09340 N 0.798
UREG_02108 Uncinocarpus reesii UREG_02108 N 0.798
ARB_04665 Arthroderma benhamiae ARB_04665 N 0.788
SNOG_11545 Stagonospora nodorum SNOG_11545 N 0.783
EAT81253.1 Phaeosphaeria nodorum EAT81253.1 N 0.783
estExt_Genewise1.C_280098 Cochliobolus heterostrophus C5 estExt_Genewise1.C_280098 N 0.774
PredSwiss_CON474.2 Pneumocystis carinii PredSwiss_CON474.2 N 0.770
PTRG_04758 Pyrenophora tritici repentis PTRG_04758 N 0.769
estExt_Genewise1Plus.C_chr_10431 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_10431 N 0.769
estExt_Genewise1.C_90098 Mycosphaerella fijiensis estExt_Genewise1.C_90098 N 0.769
PredSwiss_ASS2010_2387.1 Pneumocystis carinii PredSwiss_ASS2010_2387.1 N 0.761
SJAG_00474 Schizosaccharomyces japonicus SJAG_00474 N 0.721