CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
PABG_01625
(
Paracoccidioides brasiliensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PABG_01625
T29933_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PABG_01625T0
RRM
10
80
VFLGNIPYNLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFADADAAASAVRNLNDYEIMGRKIR
Links
Other
RRM
family RBPs
Other
Paracoccidioides brasiliensis
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CpipJ_CPIJ002280
Culex pipiens
CpipJ_CPIJ002280
N
0.000
GI20446
Drosophila mojavensis
FBgn0143182
N
0.000
GL11478
Drosophila persimilis
FBgn0149087
N
0.000
GM20997
Drosophila sechellia
FBgn0175878
N
0.000
GD10528
Drosophila simulans
FBgn0182299
N
0.000
GJ20116
Drosophila virilis
FBgn0207256
N
0.000
GK10751
Drosophila willistoni
FBgn0212763
N
0.000
GE19164
Drosophila yakuba
FBgn0236524
N
0.000
PHUM308070
Pediculus humanus
PHUM308070
N
0.000
GH20604
Drosophila grimshawi
FBgn0128067
N
0.000
GG23320
Drosophila erecta
FBgn0115471
N
0.000
GA15511-RA
Drosophila pseudoobscura
FBgn0075528
N
0.000
amel4_ncbi_hmm812
Apis mellifera
amel4_ncbi_hmm812
N
0.000
DGIL_AUG5s1025g3t1
Acyrtosiphon pisum
DGIL_AUG5s1025g3t1
N
0.000
DGIL_AUG5s12809g1t1
Acyrtosiphon pisum
DGIL_AUG5s12809g1t1
N
0.000
DGIL_AUG5s14548g2t1
Acyrtosiphon pisum
DGIL_AUG5s14548g2t1
N
0.000
nasonia_NCBI_hmm1324624
Nasonia vitripennis
nasonia_NCBI_hmm1324624
N
0.000
AGAP005127
Anopheles gambiae
AGAP005127
N
0.000
CPIJ002280
Culex quinquefasciatus
CPIJ002280
N
0.000
nito
Drosophila melanogaster
FBgn0027548
N
0.000
BGIBMGA004109
Bombyx mori
BGIBMGA004109
N
0.000