BGIBMGA004109 (Bombyx mori)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BGIBMGA004109 T54965_0.6 SilkDB (2008-Apr-11)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIBMGA004109 RRM 34 100
BGIBMGA004109 RRM 236 305
BGIBMGA004109 RRM 317 380

Links

Other RRM family RBPs
Other Bombyx mori RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm812 Apis mellifera amel4_ncbi_hmm812 N 0.856
AGAP005127 Anopheles gambiae AGAP005127 N 0.833
CpipJ_CPIJ002280 Culex pipiens CpipJ_CPIJ002280 N 0.832
CPIJ002280 Culex quinquefasciatus CPIJ002280 N 0.832
PHUM308070 Pediculus humanus PHUM308070 N 0.810
nasonia_NCBI_hmm1324624 Nasonia vitripennis nasonia_NCBI_hmm1324624 N 0.809
DGIL_AUG5s14548g2t1 Acyrtosiphon pisum DGIL_AUG5s14548g2t1 N 0.799
DGIL_AUG5s1025g3t1 Acyrtosiphon pisum DGIL_AUG5s1025g3t1 N 0.789
GK10751 Drosophila willistoni FBgn0212763 N 0.786
GL11478 Drosophila persimilis FBgn0149087 N 0.781
GJ20116 Drosophila virilis FBgn0207256 N 0.781
GI20446 Drosophila mojavensis FBgn0143182 N 0.781
GA15511-RA Drosophila pseudoobscura FBgn0075528 N 0.781
GD10528 Drosophila simulans FBgn0182299 N 0.776
GE19164 Drosophila yakuba FBgn0236524 N 0.776
GF13651 Drosophila ananassae FBgn0090679 N 0.776
nito Drosophila melanogaster FBgn0027548 N 0.776
GM20997 Drosophila sechellia FBgn0175878 N 0.776
GG23320 Drosophila erecta FBgn0115471 N 0.776
GH20604 Drosophila grimshawi FBgn0128067 N 0.771
DGIL_AUG5s12809g1t1 Acyrtosiphon pisum DGIL_AUG5s12809g1t1 N 0.760
NCBI_GNO_14500057 Daphnia pulex NCBI_GNO_14500057 N 0.714